Pairwise Alignments

Query, 803 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Variovorax sp. SCN45

Subject, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  148 bits (374), Expect = 1e-39
 Identities = 107/309 (34%), Positives = 161/309 (52%), Gaps = 33/309 (10%)

Query: 62  ISELSDYR-PKLPLRVFSAEGTLIGEF---GEERRNLTPISAIPKVVKDAVLAAEDSRFY 117
           ++ELS     KLP  V   E  +IG       E R L  +  +P  + + ++A ED  FY
Sbjct: 136 VAELSSLNGSKLP--VVRLEPLMIGGIYPKNLEDRILIKLDQVPPYLLETLVAVEDRDFY 193

Query: 118 DHGGVDYKGMVRAGLANLNRVK-SQGASTITMQVARNVYLSSEKTLTRKVYEVLLTFKLE 176
            H GV  K + RA   N +  K +QG ST+T Q+ +N YL++E++LTRK+ E ++   LE
Sbjct: 194 HHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQLVKNFYLTNERSLTRKLTEAMMAMLLE 253

Query: 177 HLLTKDQIFEIYLNQIYLGN----RAYGFAAASEAYFGKPLQELTIAQAAMLAGLPKAPG 232
              +K +I E YLN++++G       +GF  AS+ +FG+PL EL + Q A+L G+ K P 
Sbjct: 254 LHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFFGQPLSELKLHQVALLVGMVKGPS 313

Query: 233 ANNPVNNPQRARGRQFYVIDRMQEAGFITAEQAAEAKKEEL------HLRDAADPNRLHA 286
             NP  NP+RA  R+  V+D +++ G  TAEQ A AKK  L       L D++ P  +  
Sbjct: 314 YYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAKKMPLGVTTRGKLADSSFPGFI-- 371

Query: 287 EYVAETVRQLMYAQYGDSTYT-RGLKVYTSLVAADQAAA-------YKAL--RKGIMDYE 336
               + V++ +   Y D   T  GL+++TS     Q  A       +K L  RKG  + E
Sbjct: 372 ----DLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLTGRKGSDEVE 427

Query: 337 RRQIYRGPE 345
              +   PE
Sbjct: 428 AAMVVTNPE 436



 Score =  130 bits (326), Expect = 4e-34
 Identities = 94/293 (32%), Positives = 142/293 (48%), Gaps = 20/293 (6%)

Query: 444 EVEGAFIAMDPRDGAIKALVGGFDFGKNKFNHVTQAWRQPGSSFKPFIYSAALEKG--FT 501
           EVE A +  +P  G ++A++G        FN    A R  GS  KP +Y  ALEK   +T
Sbjct: 425 EVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTALEKPSKYT 484

Query: 502 PATVINDGPLFFDAGTTGGQPWEPKNYGGGYDGPMSMRTALMKSKNLVSIRILQSIGTRY 561
             + ++D PL    G   GQ W P+N+     G + +   +  S N+ + R+   +G   
Sbjct: 485 LTSWLSDDPLSVKGGD--GQVWTPQNFDRRSHGTVFLYQGIAHSYNISTSRLGLEVGVPN 542

Query: 562 AQEWITNFGFDKDKHPAYLPMALGAGSVTPMQMAVGYSVFANGGYRVNPYLVTRITDHKD 621
             + I   G  ++  PA+  + LGAG++TPM++A  Y   ANGG+   P    R      
Sbjct: 543 VLKTIARLGVTRE-FPAFPSILLGAGAMTPMEVATMYQTLANGGFNT-PMRGIR------ 594

Query: 622 KVLVDKQPPLLNESLRAIPQR----NAFIMDTLLQSVARAGTAAKAQAMLKRP-DLYGKT 676
            VL  +  PL     + I QR    + +++   +Q V R GT     ++L     L GKT
Sbjct: 595 SVLTAEGEPLKRYPFQ-IQQRFDAGSIYLIQNAMQRVMREGTGRSVYSVLPANLTLAGKT 653

Query: 677 GTTNDSLDAWFAGFQPTMTAISWIGYDTPRNLGDRETGGGLSLPIWINYMETA 729
           GT+NDS D+WFAGF   + A+ W+G D   N     TG   +L +W ++M  A
Sbjct: 654 GTSNDSRDSWFAGFGQDVLAVVWLGRDD--NGKTPFTGATGALQVWTSFMRKA 704