Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 256 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  112 bits (279), Expect = 1e-29
 Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 7/258 (2%)

Query: 36  RRRMIIGLRLAVLIVAL---GGWEIAARLKWIDPFFYSMPSMIYDQLVEWMRDGTSQGSL 92
           +R  ++G R   L+  L   G WE AAR+  +D  F+  PS I    V       + G L
Sbjct: 3   KRSGLLGERFIGLLTPLALLGLWEAAARMGLVDARFFPPPSSI----VHTFGALVASGEL 58

Query: 93  WMQVAVTLEETVIGFLIGSVAGVLCGIILGRNKLLSDVFSLYIQIANSIPRVVLGSIFVI 152
           W  +  +L    +G L+G V  +  G+ +G +K L       I     IP+  +  + ++
Sbjct: 59  WTNLLASLRRLFLGMLLGGVPALFLGLAMGISKPLRAAIDPLISATYPIPKSAILPLVLL 118

Query: 153 ALGLGMASKVALAVVMVFFVVFGNAFQGVREADKYMIANAQILGASPRQVTMSVVIPSAM 212
             GLG  SKV +  +  F+ +  N   GV   DK  +       AS  QV  ++ +P A+
Sbjct: 119 IFGLGEMSKVVMVALGAFYPILINTVMGVANIDKIYLDVGHNYRASRWQVFRTIALPGAL 178

Query: 213 SWILASLHVSFGFALVGAVVGEFLGAKEGIGLLISTAQGAFNASGVFAAMIVLAVVALAA 272
             I+A + ++ G  L+   + E + A +GIG +I  A        ++  ++V+A++    
Sbjct: 179 PSIMAGVKLAMGMGLILIAISEMVAASDGIGYMIWNAWQVLTVDTMYVGLLVIALLGFVF 238

Query: 273 DFLLSSLEKRLLKWRPAA 290
             +L  +E+ L+ W+  A
Sbjct: 239 SVILDEIERMLIPWKAKA 256