Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 261 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  105 bits (262), Expect = 1e-27
 Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 11/245 (4%)

Query: 42  GLRLAVLIVALGGWEIAARLKWIDPFFYSMPSMIYDQLVEWMRDGTSQGSLWMQVAVTLE 101
           GL L +L+   G W  A       P  Y +PS        W + G     L+ Q  VTL 
Sbjct: 9   GLGLLLLLWQTGTWLFA-------PPRYILPSPADVAAAFWRQSGF----LFGQAMVTLG 57

Query: 102 ETVIGFLIGSVAGVLCGIILGRNKLLSDVFSLYIQIANSIPRVVLGSIFVIALGLGMASK 161
           E  +G   G  AG+L    +        +    + +  + P  VL  I V+  G GMASK
Sbjct: 58  EMALGLAAGVTAGILVAFTIAATPRFGRLVWPMVLVLQAFPVFVLAPILVLWFGFGMASK 117

Query: 162 VALAVVMVFFVVFGNAFQGVREADKYMIANAQILGASPRQVTMSVVIPSAMSWILASLHV 221
           V +  V++FF V      G+   D+ ++  A +  AS  Q+   + +P A+  +++ L V
Sbjct: 118 VVMTAVIIFFPVASAFTDGLNRTDRAILDAASLTEASHWQILTRLRVPLALPSLISGLRV 177

Query: 222 SFGFALVGAVVGEFLGAKEGIGLLISTAQGAFNASGVFAAMIVLAVVALAADFLLSSLEK 281
           +   A +GAV+GE++GA  G+G ++  +        +FAAM +LAV+A+    ++     
Sbjct: 178 AAPLAPLGAVIGEWVGASAGLGFVMIQSNARMQTDTMFAAMAILAVMAVLLRLIVDRATA 237

Query: 282 RLLKW 286
            L  W
Sbjct: 238 NLAPW 242