Pairwise Alignments

Query, 341 a.a., Fe2+-dicitrate sensor, membrane component from Variovorax sp. SCN45

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  195 bits (496), Expect = 1e-54
 Identities = 121/323 (37%), Positives = 159/323 (49%), Gaps = 21/323 (6%)

Query: 23  VRKEAIAWYARLCSGDASEADRENWRRWHRAHPDHQRAW-------QRFEAMQATLKRVP 75
           V + A  W+ARL +     A +  W  W      H+ AW       QRF  +    ++  
Sbjct: 10  VLQAAAGWFARLHAAHNDAAIQAQWHAWLNEDTRHRLAWSYVENINQRFGGLSGQAEQ-- 67

Query: 76  AHMAASTLRAAHADRRRVLRGIAVLAGGGSLAYLSWQATGTDGGWRAWLADYRTGTGEQR 135
           A     ++R     RR VL  + V    G L +  WQ    D   RAW A YRTG GE R
Sbjct: 68  ARQVFDSVRRDRHSRRAVLGSLCVAGVAGVLGWGGWQRGWVDSP-RAWFATYRTGLGEVR 126

Query: 136 SVTLADGSLLMLNTRTSVDVSIDATHRLISLREGEILAETAKHRRVPGAARTDSRPFLVA 195
            VTLADGS L LN  T++DV  D   R + L  GEIL E+ K          D RP  V 
Sbjct: 127 PVTLADGSQLWLNGGTALDVQFDEGSRQLRLYRGEILIESGK----------DPRPLSVV 176

Query: 196 TPHGRILALGTRFTVRTDGARTVVSVLEDAVEVRASRAPGHVVRLEAGQQVAFTGVSIEA 255
           T  GR+  LGTRF+VR  G +T +SV   AV+   S + G    L+AGQ + F    + A
Sbjct: 177 TRAGRVQPLGTRFSVRDQGLQTTLSVFAGAVQATCSGS-GRQTTLQAGQMMVFDAQQVGA 235

Query: 256 PQPADPALAEWEHGSLVVNDWRLGDVVAELARYHRGRLACDPAIADIRVSGAFPVMDTDK 315
           P  A     +W  G LV  D  L  ++  L  Y  G L  DPAI  +R  G FP++DTD+
Sbjct: 236 PSTAQRLREDWSRGVLVAEDMPLVQMIDILRDYRHGHLGIDPAIGSLRAVGTFPLLDTDR 295

Query: 316 ALAVIVRAFPVRVTGLTRYWVTL 338
           ALA++ RA P+RV     +WV++
Sbjct: 296 ALAMLERALPIRVVRTLPWWVSI 318