Pairwise Alignments

Query, 309 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 310 a.a., Transcriptional regulator PcaQ from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 7e-30
 Identities = 88/283 (31%), Positives = 131/283 (46%), Gaps = 21/283 (7%)

Query: 9   SLMLHVRPRQLLLLARLDTHRHLGRAAEAMNISQPAATKLLQQLEDSLGERLFERLARGM 68
           +L   ++ R LL    +     L RAA+ ++ISQPA +K L++LED L  RLFER  +G+
Sbjct: 2   NLDTRIKYRHLLCFLEIARQGSLARAADILSISQPAISKTLKELEDLLEARLFERSRQGV 61

Query: 69  EPTAYGQILIRYAHRVLSDFGTAREEMLALRSGLSGA---------LRVGSVPGAVPELL 119
           E T  G   +RYA             + ALR G+S           +R+G +      L+
Sbjct: 62  ELTPAGTRFMRYAG----------PSVQALRDGVSSLRGEARAPSQVRIGVLSTVEGLLM 111

Query: 120 APALVEYHRRHPQVAVSVVVETSDVIQAQLEQGDVDLVLGRLTDGHDEAKYASVPLLGES 179
              L   H+RH  + +SVV   S  +  QL  G+++LV+GR+TD       +   L  ES
Sbjct: 112 PEVLCRLHQRHEALVISVVTGVSAQLLGQLHLGELELVVGRMTDSPQIQGLSFEHLYSES 171

Query: 180 QVVVVRAGHPVFERANLTLAEMADWSWVLQPPGSPQRGRFEAAMREAGIRTRLDIIETAS 239
             +VVR GHP+     +   ++  +  VL P G+  R   ++   + GI+     +ET S
Sbjct: 172 MSLVVRPGHPLLASTPVERGQVGRYPLVLPPAGTTIRQHADSLFVQCGIQMPAQRLETLS 231

Query: 240 PIAITALLENSDMAAVMPASQASHYARLGVLRTVPIELPVRVP 282
                  L  SD   V P        R G L  V ++L VR P
Sbjct: 232 LALSRRYLLGSDGLWVAPRDAVLLDLRRGEL--VELDLGVREP 272