Pairwise Alignments

Query, 349 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 385 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

 Score =  259 bits (662), Expect = 8e-74
 Identities = 158/352 (44%), Positives = 203/352 (57%), Gaps = 31/352 (8%)

Query: 3   GIEFRNITKRYGTDKNAPLAVKGISFEVPVGTLTTILGPSGCGKTTTLRMIAGLESPTSG 62
           G++   +TKR+G       A+     ++  G   T+LGPSGCGKTT L +IAG      G
Sbjct: 29  GVQIDGVTKRFGD----ATALHEAWLKIADGEFMTLLGPSGCGKTTLLNLIAGFLEADGG 84

Query: 63  AIFMGGRDVTTLGPAERNVSMMFQSYALFPHMNVIENVGYGLRMSGVKKDEATARAREAL 122
            IF+GGR +T   P +R + ++FQ+YALFPHMNV +NVGYGLRM GV K E   R  EAL
Sbjct: 85  EIFVGGRLMTETAPYDREIGVVFQNYALFPHMNVAKNVGYGLRMRGVAKSEIETRVAEAL 144

Query: 123 RGVGLVGFDERLPSELSGGQQQRVALARALVLEPAVLLFDEPLSNLDARLRREMREEIRA 182
             V L GF ER P +LSGGQQQRVALARALV+ P VLL DEP S LD  LR  M+ E++ 
Sbjct: 145 ALVKLDGFGERKPRQLSGGQQQRVALARALVIRPKVLLLDEPFSALDKNLRGAMQVELKE 204

Query: 183 LQQRLKLTVAYVTHDQSEALAVSDQIIVMDHGVIAQRGTPEQLYGRPESEFVAGFMGEAS 242
           +Q+RL +T  +VTHDQSEAL++SD+I VM  G I Q GTP+++Y RP   FVA F+G+ +
Sbjct: 205 IQRRLGVTTIFVTHDQSEALSMSDRIAVMSQGRIRQVGTPDEIYRRPLDPFVASFVGDVN 264

Query: 243 VFPATAQ----PDGSVAMGPLRL----QPRHAVAPG-AVKVAVRPEAWRIGAG-GAADGL 292
           V P   +       +V +   RL         +APG AV + VRP+A RI  G G   G 
Sbjct: 265 VLPGRLERRIGETATVLIAEGRLSVSADTLEGIAPGAAVDLFVRPDAVRIAEGEGLVSGT 324

Query: 293 PATLRKAAYLGSFYEYGFDTTLGPVFVVSTDLSRPLAAGAQATLSLGAHGVS 344
            AT     Y GS  +   D                 A G + T+ +  HG S
Sbjct: 325 VAT---HVYQGSHVDVLVDVA--------------AARGGRVTVRVPGHGAS 359