Pairwise Alignments

Query, 349 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 329 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  237 bits (604), Expect = 4e-67
 Identities = 136/283 (48%), Positives = 174/283 (61%), Gaps = 16/283 (5%)

Query: 26  ISFEVPVGTLTTILGPSGCGKTTTLRMIAGLESPTSGAIFMGGRDVTTLGPAERNVSMMF 85
           I   +  G   T+LGPSGCGK+T LR IAGL S  SG I + G D+  L P +R + M+F
Sbjct: 22  IDCHIERGEFVTLLGPSGCGKSTLLRCIAGLTSVDSGQILLDGHDIVPLSPQKRGIGMVF 81

Query: 86  QSYALFPHMNVIENVGYGLRMSGVKKDEATARAREALRGVGLVGFDERLPSELSGGQQQR 145
           QSYALFP+M V +NV +GLRM  VK DE+  R RE L  V L  F  R P +LSGGQ QR
Sbjct: 82  QSYALFPNMTVEQNVAFGLRMQKVKADESQLRVREVLELVELGKFAGRYPHQLSGGQCQR 141

Query: 146 VALARALVLEPAVLLFDEPLSNLDARLRREMREEIRALQQRLKLTVAYVTHDQSEALAVS 205
           VALAR+LV  P +LL DEPLS LDAR+R+ +RE+IRA+Q+ L LT  +VTHDQ EAL +S
Sbjct: 142 VALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRAIQRELGLTTIFVTHDQEEALTMS 201

Query: 206 DQIIVMDHGVIAQRGTPEQLYGRPESEFVAGFMGEASVFPATAQPDGSVAMGPLRLQPRH 265
           D+I +M+ G I Q G  E LY  P   F AGF+G  ++  A +           RL  R 
Sbjct: 202 DRIFLMNQGRIVQSGDAETLYTAPVDLFAAGFIGNYNLLDADSAS---------RLLQR- 251

Query: 266 AVAPGAVKVAVRPEAWRIGAGGAADGLPATLRKAAYLGSFYEY 308
              P A ++A+RPE+  +G  G  D   A +R  + LG+   Y
Sbjct: 252 ---PVASRLAIRPESITLGEHGELD---AEVRSHSLLGNVIRY 288