Pairwise Alignments

Query, 349 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 358 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  243 bits (621), Expect = 4e-69
 Identities = 135/305 (44%), Positives = 189/305 (61%), Gaps = 18/305 (5%)

Query: 1   MNGIEFRNITKRYGTDKNAPLAVKGISFEVPVGTLTTILGPSGCGKTTTLRMIAGLESPT 60
           M  +  R + K YG    A   VKGI  E+  G     +GPSGCGK+TTLRM+AGLES T
Sbjct: 1   MASVSLRKLDKSYG----ALRIVKGIDLEINDGEFVVFVGPSGCGKSTTLRMVAGLESIT 56

Query: 61  SGAIFMGGRDVTTLGPAERNVSMMFQSYALFPHMNVIENVGYGLRMSGVKKDEATARARE 120
            G + +G R V  L P ER+++M+FQ YAL+PH  V EN+G+ L++ GV   +A A   E
Sbjct: 57  GGEVKIGDRVVNQLPPRERDIAMVFQDYALYPHKTVRENMGFSLKVRGVSASQANASIDE 116

Query: 121 ALRGVGLVGFDERLPSELSGGQQQRVALARALVLEPAVLLFDEPLSNLDARLRREMREEI 180
           A + +G+    +R P +LSGGQ+QRVA+ RA+V  P V LFDEPLSNLDA+LR ++R EI
Sbjct: 117 AAKMLGIEHLLDRRPGQLSGGQRQRVAMGRAIVRRPQVFLFDEPLSNLDAKLRGQVRTEI 176

Query: 181 RALQQRLKLTVAYVTHDQSEALAVSDQIIVMDHGVIAQRGTPEQLYGRPESEFVAGFMGE 240
           + L Q+L  T+ YVTHDQ EA+ ++D+I+++  G I Q GTP+++Y RPES FV GF+G 
Sbjct: 177 KRLHQQLGTTIIYVTHDQVEAMTLADRIVILRGGDIEQVGTPDEVYNRPESVFVGGFVGA 236

Query: 241 ASVFPATAQPDG---------SVAMGPLRLQPRHAVAPGAVKVAVRPEAWRIGAGGAADG 291
            ++  A A+ +G         S+ M  +R      +    V V +RPE +     G A+G
Sbjct: 237 PAMNFARARVNGDRLAFSDGNSLPMAAIRPSRETGLEGRDVIVGIRPEHF-----GPAEG 291

Query: 292 LPATL 296
             + L
Sbjct: 292 FDSQL 296