Pairwise Alignments

Query, 345 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

 Score =  320 bits (820), Expect = 3e-92
 Identities = 170/322 (52%), Positives = 221/322 (68%), Gaps = 9/322 (2%)

Query: 22  AHDLARTFDVSPPWLNRVLERKPRVLLHAVDGVSFSIERGKTLALVGESGCGKSTVARLL 81
           A +L R ++VS          K   L+ A++GVSF +E GKTLA+VGESGCGKST+AR L
Sbjct: 7   ARELTRHYEVSRGLF------KGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARAL 60

Query: 82  VGLYAPTRGGLQFDGQDAHAAFKTSEGRKLRRRIQMIFQDPYASLNPRWIVEDIIGEPLR 141
             +  P+ G LQ  G +   A K +E ++LRR +QM+FQ PYASLNPR  + D + EPL 
Sbjct: 61  TLIEEPSSGSLQIAGTEVKGASK-AERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLL 119

Query: 142 EHGIISDKAALRERVGELLKSVGLSPLDMSKYPHQFSGGQRQRISIARALATQPEFLVCD 201
            +  +S KA  R++V ++++ VGL P    +YPH FSGGQRQRI++ARA+  QP+ LV D
Sbjct: 120 INTSLS-KAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVAD 178

Query: 202 EPTSALDVSVQAQVLNIMKDLQREQGLTYLFISHNLAVVRHVADQVGVMYLGRLVEVADK 261
           EPTSALDVS+QAQVLN+  DLQ+E    Y+FISHNLAVVRHVADQV VMYLGR  E+  K
Sbjct: 179 EPTSALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPK 238

Query: 262 QKLFAAPQHPYTRMLLDAIPQMKHTG-RSRTPVQGEVPNPLNPPTGCAFHPRCPHANARC 320
           + ++A P HPYT+ LL A P +     + +  + GE+PNPLNPP GCAFH RCP+A  RC
Sbjct: 239 EDIYAKPLHPYTQALLSATPAIHPDPLKPKIRIVGELPNPLNPPDGCAFHKRCPYATERC 298

Query: 321 SAERPKLLGIAGVQVACHAVEE 342
           + E P L  ++  QVACH  E+
Sbjct: 299 AKEVPALRQVSTRQVACHYAEQ 320