Pairwise Alignments

Query, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  218 bits (555), Expect = 1e-61
 Identities = 116/278 (41%), Positives = 179/278 (64%), Gaps = 17/278 (6%)

Query: 29  IALVCVV--CAVFAGWVSPHNPFDLAALELGDARL-PPAWSAEGSSKYLLGTDDQGRDIL 85
           +A +C+V  CA+FA WV+PH+P +    +  D  L PP W   G+ +++LGTD+ GRD+L
Sbjct: 42  LAFMCLVVFCALFAPWVAPHDPSE----QYRDFLLTPPVWLEGGTWQFILGTDELGRDLL 97

Query: 86  SAVIYGARISLIVGLVSVVLSVVVGVVLGLLAGFFGGWLDSFLMRVCDVMLSFPPILVAL 145
           S +I GAR+SL++GL SVV+S++ G++LGLLAGFF   L   +MR+ DVML+ P +L+A+
Sbjct: 98  SRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLAV 157

Query: 146 LIAGVGRALFPGAHESLAFGVLIVSISLTGWVQYARTVRGSTLVERNKEYVQAARVTGVA 205
            I  +   L PG   +      +++I++     Y R  R + + E N++YV AAR+ G  
Sbjct: 158 AIVAI---LGPGLINT------VIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAG 208

Query: 206 PMRIMLRHVLPNVLGPVTVLATIQVATAIITEATLSFLGVGVPPTSPSLGTLISIGNQYL 265
             R+M   VLPN + P+ V AT+  ++AI+  A L FLG+GV P +P  GT+++    Y+
Sbjct: 209 LPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYI 268

Query: 266 FSGEWWITVFPGLMLVLIALSVNLLGDWLRDALNPRLR 303
               WW+   PGL ++L  L++NL+GD LRDAL+P+L+
Sbjct: 269 -ERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLK 305