Pairwise Alignments

Query, 527 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 512 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  239 bits (609), Expect = 2e-67
 Identities = 160/503 (31%), Positives = 250/503 (49%), Gaps = 22/503 (4%)

Query: 22  VASAQTIRIANQGDALSLDPHSLNESLQLSVTANVYETLVGRNKDLSLAPLLATSWKQTS 81
           +A A  + I       S+DP         ++  N+++ LV +N+   + P LA SWK  +
Sbjct: 16  IAQAADLTIGLASSTTSMDPQFYVGGANSAMARNLFDGLVNQNEKQQITPALAVSWKAVN 75

Query: 82  PNVWRFELRKGVVFHDGTPFTADDVVFSFAR----AQGDGSDMRATLSDIKAVRKVGDLA 137
              W+F LR  V FHDGT F+A DVV S  R    A+   S     ++DI  +R++  L 
Sbjct: 76  DTTWQFTLRPNVKFHDGTDFSARDVVASVKRVALAAKNSPSAYTPYVADIGEIREIDPLT 135

Query: 138 VEIETNGPFPILPDVISLTMIMSKKWCEENQATKPVDRRKGIENTASFKANGTGPFRVRE 197
           VEI+T GP  +L + +S   I+  +      A +P D   G ++       GTGPF+   
Sbjct: 136 VEIKTKGPAALLLNNLSRIAILPAR-----LADQPTDVLNGGKDVI-----GTGPFKFVS 185

Query: 198 RQPNVRTVFTRNGTYWGKIDGNAQ--EVIFTPIANPATRVAALVSGEVDVMEPVPVQDIA 255
             P+ + V +RN  YWG   G A+   V    I N + R+AAL+SG+VD++E VP  D A
Sbjct: 186 YTPDDKVVLSRNDHYWG---GKAEWDTVTLRVIKNSSARIAALLSGDVDMIESVPTADRA 242

Query: 256 RINAAPNARVITGPEMRTIFLGMDQKRDELQYS-NVKGKNPFKDKRVRQAFYQAIDIAGI 314
            I         + P  R ++L  DQ RD   ++    GKNP K   VRQA   AI+   +
Sbjct: 243 TIARQQAFATESVPGNRILYLHPDQDRDVSPFAKGDDGKNPLKKAEVRQAMSLAINRDAL 302

Query: 315 QRTVMRGASRPTALLVGPGINGWTAEQDKRLPYDVEAAKKLLTEAGYPNGFEVSLNCPND 374
            + ++ G   P++ LV  G  G++A+    + YD+  AK+ L  AGYPNGF ++ +  ND
Sbjct: 303 VQRILDGQGLPSSQLVPQGYPGYSAKIPAPV-YDLAQAKQKLAAAGYPNGFTLTFHASND 361

Query: 375 RYVNDGQICQSVASNLAKIGVKINLVAETKGTYFPKVLRRDTSFYMLGWTPTTYDSHNAL 434
           RY ND +I Q++    ++ G+K  +V      YF K  +R+ S  M G    T ++   L
Sbjct: 362 RYPNDAKIAQALGQMFSQAGIKTEVVTMPGNVYFAKAAQREFSLVMGGAAIETGEASGVL 421

Query: 435 SSLTSCPDDKGTGQFNLGAYCNPKLDELTKKIQSEGDKDKRNEMIKEAFKIHADDVGHLP 494
             L         GQ N G Y N + D+L  + ++  D+ +R+ ++++A ++   + G +P
Sbjct: 422 GPLLE-TFGPNAGQGNRGRYSNAEFDKLLNQARATLDERQRDALLQQATELAMKEQGVIP 480

Query: 495 LHQQSLAWGVSKKVELVQLADNF 517
           L   S  W + K    V   D +
Sbjct: 481 LLFLSNTWAMKKGYSYVGRTDGY 503