Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 323 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  211 bits (536), Expect = 3e-59
 Identities = 120/316 (37%), Positives = 180/316 (56%), Gaps = 7/316 (2%)

Query: 5   VLRRLIQAVIVMIAVAFIAFLLFQYV-GDPVVFLLGQDAKPDQIRELRAALGLDQPFFVQ 63
           V+RR  Q + ++  ++ ++FLL +   GDPV   +      D I+ +R +LGLDQP  +Q
Sbjct: 5   VVRRFGQLLPMLFFISLVSFLLVKLAPGDPVQAYITPRMSLDDIKRVRHSLGLDQPLAMQ 64

Query: 64  FWHFLVNAAQGEFGLSLRQGAKVSRLIGERFPATLELALVAAVLALFIGIPMGVYTALRR 123
           +  +L N  QG+ G SL     V  LI ER PATL L   + +LA+ I +P+G+     R
Sbjct: 65  YLLWLKNVLQGDLGYSLISHRPVLTLIVERLPATLGLMGASLLLAVAIAMPLGLLAGAFR 124

Query: 124 GTFMSQFFMTVSLLGVSLPTFLIGILLILVFAVTLGWFPSFGRGETVKFGWWTSGLFSVD 183
             ++      V+ +G+S+P F  GILLI++F+V L W PS G         W      +D
Sbjct: 125 HRWLDHLLNLVAYIGISVPIFWFGILLIIIFSVQLNWLPSMGMRTVGAADSW------LD 178

Query: 184 GWQHIVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHALKNTL 243
             +H VLP V L  + L+  +R +R+  +  L  DY++   A G +   I F H LKN +
Sbjct: 179 VVRHGVLPCVALTFYNLSHYVRYIRSHTITQLSADYVQTQLAYGATRAHILFRHVLKNVM 238

Query: 244 VPVMTITGLQLGGLIAFAIITESVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIFVVI 303
           +PV+T+ GL    L+  A +TESVF WPGMGLL +Q++T  D P++ A + L A + VV 
Sbjct: 239 LPVITLFGLSFSELVVGAYVTESVFSWPGMGLLGLQSITSLDYPLIMAMVMLSACMLVVG 298

Query: 304 NLVVDLLYFVVDPRLR 319
           NL+ D+LY V DPR++
Sbjct: 299 NLLADVLYRVADPRIK 314