Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 314 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  261 bits (667), Expect = 2e-74
 Identities = 131/313 (41%), Positives = 207/313 (66%), Gaps = 4/313 (1%)

Query: 10  IQAVIVMIAVAFIAFLLFQYVGDPVVFLLGQDAKPDQIRELRAALGLDQPFFVQFWHFLV 69
           +QA++V +A+A I F+    +G P+  LL  +A  D    L A LGLD+P + QF+ FL 
Sbjct: 1   MQAILVALAMALIVFVGLHLIGSPIETLLPPEATYDDRLRLIADLGLDRPLYEQFFLFLK 60

Query: 70  NAAQGEFGLSLRQGAKVSRLIGERFPATLELALVAAVLALFIGIPMGVYTALRRGTFMSQ 129
              QG  G+S         LI  R PATLELA  A +L+L +G+P+G+    +  + +++
Sbjct: 61  GLLQGNLGVSYVYKEPAVELILSRLPATLELAFAAVLLSLIVGVPLGLAAGWKPESPLAR 120

Query: 130 FFMTVSLLGVSLPTFLIGILLILVFAVTLGWFPSFGRGET-VKFGW-WTSGLFSVDGWQH 187
             M  S+ G SLP F I +LLI++F+V LGW PS GRG T + FG  W+    ++DG +H
Sbjct: 121 IIMIGSIFGFSLPIFWIAVLLIMIFSVQLGWLPSSGRGATEILFGIPWS--FVTLDGLRH 178

Query: 188 IVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHALKNTLVPVM 247
           ++LPA++L++F ++++ RL  A + E + ++Y++FARA+GLS + I   H LKN ++PV+
Sbjct: 179 MLLPAISLSLFNISMVTRLTEAGVREAMSSEYVRFARAKGLSPKRILSVHVLKNVMIPVV 238

Query: 248 TITGLQLGGLIAFAIITESVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIFVVINLVV 307
           T+ GL +G  IAF+++TE++F WPG+G + I ++   D PV+ AYL L+ ++FV+INLVV
Sbjct: 239 TVVGLDIGQTIAFSVVTETIFAWPGVGKIIIDSIAALDRPVIVAYLMLVVVMFVIINLVV 298

Query: 308 DLLYFVVDPRLRV 320
           D+ Y ++DPR+R+
Sbjct: 299 DVTYRLLDPRIRL 311