Pairwise Alignments

Query, 393 a.a., Outer membrane porin protein 32 precursor from Variovorax sp. SCN45

Subject, 328 a.a., Outer membrane protein (porin) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 80.1 bits (196), Expect = 8e-20
 Identities = 94/365 (25%), Positives = 144/365 (39%), Gaps = 86/365 (23%)

Query: 34  GSVKVSRTALANSGYNSSRLGFRGTEDLGGGLAASFWLEAPISNDDG-ATGVSTFSRRST 92
           GSV V+   L + G  +SR G +G+EDLGGGL A F LE      +G AT  + F+R+S 
Sbjct: 45  GSVSVN--GLNSGGLATSRWGVQGSEDLGGGLKAIFKLEQGFDASNGTATANTAFNRQSW 102

Query: 93  LSLSGGFGEIRLGRDYTP----TFWNDTVFDPFGTNGVGANLINTASNYNFTTGGAKDTG 148
           + L GGFG ++ G  ++      +  +++FD    +   A  + + + YN          
Sbjct: 103 VGLEGGFGTVQFGNVWSAFDDVFYIGNSIFDAVAFS--PAYAVMSVAAYN---------- 150

Query: 149 GFAGNQNYSRASNSIGYFLPPNLGGFYGQVMYAFHENDKYSGGQFTPADSATSKSRAGRY 208
                    +  N++ Y   PN GGF   V +   EN      Q                
Sbjct: 151 --------DKPRNALRY-TSPNFGGFSAAVSHGLDENALVKRDQ---------------- 185

Query: 209 IGGRVGYANGPLDVAVAYGNSTVGDQFFAGTTDSVKTFNLGASYDFGPAKLFGELSRLKN 268
               + YA GPL  A AY          AG     K     A+YD G A L G + + +N
Sbjct: 186 TDFNLQYAAGPLTAAFAYQLQNDA----AGVGQDAKFTYFTAAYDLGVAVLKGGVGQTRN 241

Query: 269 SRDYAIRPITGARPDVDLTGYLIGVTVPVGAGLIRASYSAVKYDRNLPFDYFTPANNLDP 328
              YA +             + IG   P+ + L  ++  A   D+          +  D 
Sbjct: 242 V--YATK----------TNDWQIGADFPLSSALSLSTGYASSKDK----------DGTDT 279

Query: 329 KANKLAIGYVHNLSKRTALYATVARVSNKNGAALTVGGPGFYKVTDRVFTPKTSTGYDFG 388
           K    ++G ++ LSKRT+ YA   +   +      VGG    KV          + +  G
Sbjct: 280 KRTGYSVGALYALSKRTSTYAAFTKAKEE------VGGTTAAKV----------SAFGVG 323

Query: 389 IRHAF 393
           ++H F
Sbjct: 324 LQHKF 328