Pairwise Alignments

Query, 412 a.a., General secretion pathway protein F / Type II secretory pathway, component PulF from Variovorax sp. SCN45

Subject, 402 a.a., type II secretion system protein F from Pseudomonas simiae WCS417

 Score =  199 bits (506), Expect = 1e-55
 Identities = 131/409 (32%), Positives = 207/409 (50%), Gaps = 23/409 (5%)

Query: 4   YSFEAIDASGQSREGVLEADTARSARSLLRAQALIPLSVKPVGSDHVNGTGQRSGLGRWL 63
           Y++E I+  G+   G          ++ LR Q + P  V+           ++S +   L
Sbjct: 8   YAWEGINRKGRRVSGQTTGHNPALVKAQLRKQGICPGHVR-----------KKSPVLSSL 56

Query: 64  GGGKRVFNSTGLAVWTRQLAGLVSSGLPLERALTALTDEAESEPQRNLVASLRAEVNAGS 123
                   ST + ++TRQLA L+ +G+PL +A   + +  ++   R  V  L+  + AG+
Sbjct: 57  AAS---ITSTDITLFTRQLATLLKAGIPLLQAFDIIAEGFDNRALRERVQGLKQAIEAGT 113

Query: 124 PFARALSAHSREFSPIYTAVIGAGEQSGNLGLVLDRLADDLEERQALQQKLIGAALYPAI 183
             A AL    R F  +Y  ++ AGEQ+G L  +L+R+A   E+ + L+ ++  A  YP  
Sbjct: 114 SLAEALRKQPRCFDELYCNLVAAGEQAGALETLLERVAIHREKSEQLKTRIKKAMTYPIT 173

Query: 184 VTLVAIVIVIFLVSYVVPQVAQVFAGTKRSLPFLTTVMLSLSAGVRNYGWWMLGAVVLGA 243
           V +VA ++   L+ +VVPQ   +FAG    LP  T  ++ LS  ++   WW   AV LG 
Sbjct: 174 VLVVASLVTGVLLVHVVPQFQNLFAGVDGKLPGFTLQVIGLSEFMQK-AWW---AVALGG 229

Query: 244 IGARLALAQ-----EAFRLKFDAAWLKLPLVGKLARGYNAARFASTLAMLATAGVPILRA 298
           +   L L +       FRL  D+  LK P+ GKL      ARFA TL+    AGVP+L+A
Sbjct: 230 LAGGLGLREAYRRLADFRLWLDSCLLKAPVAGKLLSKSAVARFARTLSTTFAAGVPLLQA 289

Query: 299 LQAASETLGNRAMRADALDALVLVREGAPLASALAQKKRFPGLVSMFARLGEQTGTLPLM 358
           L + +   G+   R         V  G PL  ++     FPG+      +GE++GTL  M
Sbjct: 290 LDSVAGAAGSGPFRRAIEQMRRDVATGMPLNQSMLTSGLFPGMAIQMTAIGEESGTLDRM 349

Query: 359 LQRAANQLGAEVQRRAMHLATILEPLLIVAMGGVVMLIVLAVMLPIIQL 407
           L++ AN   A+V     HL  ++EPL++V +GG+V  +V+A+ LP+ QL
Sbjct: 350 LEKVANHYEADVDNLVDHLTHLMEPLIMVVLGGIVGALVIAMYLPVFQL 398