Pairwise Alignments

Query, 412 a.a., General secretion pathway protein F / Type II secretory pathway, component PulF from Variovorax sp. SCN45

Subject, 402 a.a., Type 4 fimbrial assembly protein PilC from Pseudomonas putida KT2440

 Score =  164 bits (414), Expect = 6e-45
 Identities = 122/409 (29%), Positives = 196/409 (47%), Gaps = 15/409 (3%)

Query: 4   YSFEAIDASGQSREGVLEADTARSARSLLRAQALIPLSVKPVGSDHVNGTGQRSGLGRWL 63
           Y +   DA+G    G     +    R+ L  Q +   S++P            SGL   L
Sbjct: 8   YHWHGTDANGAPVSGQTPGRSPAYVRAGLIRQGITVASLRPA-----------SGLAFSL 56

Query: 64  GGGKRVFNSTGLAVWTRQLAGLVSSGLPLERALTALTDEAESEPQRNLVASLRAEVNAGS 123
              +   +  G   ++RQLA L+ +G+PL +A   +        Q  L+  L+ +V +G 
Sbjct: 57  PKRREKADPAG---FSRQLATLLKAGVPLLQAFEVMGRSGCDAAQAALLERLKQDVASGL 113

Query: 124 PFARALSAHSREFSPIYTAVIGAGEQSGNLGLVLDRLADDLEERQALQQKLIGAALYPAI 183
             A AL  H   F  +Y  ++  GEQSG L   L++LA  LE+R+ L +K+  A +YP +
Sbjct: 114 GLADALQRHPAWFDALYCNLVRVGEQSGTLDRQLEQLAGMLEQRRVLHKKVRKAMIYPLL 173

Query: 184 VTLVAIVIVIFLVSYVVPQVAQVFAGTKRSLPFLTTVMLSLSAGVRNYGWWMLGAVVLGA 243
           + L  + +   L+  V+P+   +F+G   +LP  T  +++LS G+  +   +L   V+  
Sbjct: 174 LLLTGLGVSAILLLEVIPKFESMFSGMGAALPAFTQWVINLSTGLSRFAPLLLVMGVVMG 233

Query: 244 IGARLALAQEA-FRLKFDAAWLKLPLVGKLARGYNAARFASTLAMLATAGVPILRALQAA 302
           +  R    Q A  RL      L LP+ GKL      ARFA +LA    AGVP+L AL   
Sbjct: 234 VAVRQLYRQHAPARLWISRRVLGLPVFGKLLGQAALARFARSLATSYGAGVPLLDALGTV 293

Query: 303 SETLGNRAMRADALDALVLVREGAPLASALAQKKRFPGLVSMFARLGEQTGTLPLMLQRA 362
           +   G        L     +  G  L  A+A +  FP L+     +GE +GTL  ML++A
Sbjct: 294 ARVTGGDLHEQAVLRLRQGMANGQGLNQAMAGEPLFPPLLVQLTAIGESSGTLDQMLEKA 353

Query: 363 ANQLGAEVQRRAMHLATILEPLLIVAMGGVVMLIVLAVMLPIIQLNQFV 411
           A+    +V +    L ++LEP +++ +G +V  +V+A+ LPI QL   +
Sbjct: 354 ASHYEEQVSQALDQLTSLLEPAIVLILGLLVGGLVVAMYLPIFQLGSLI 402