Pairwise Alignments

Query, 428 a.a., Putative diheme cytochrome c-553 from Variovorax sp. SCN45

Subject, 1187 a.a., nicotinate dehydrogenase subunit B (EC 1.17.2.1) (from data) from Pseudomonas putida KT2440

 Score =  263 bits (671), Expect = 3e-74
 Identities = 164/423 (38%), Positives = 227/423 (53%), Gaps = 27/423 (6%)

Query: 5    RRTGWVALVLVVLVALASGVLVAMNLRGEDALPERAESFNATPQ--------LVERGRYL 56
            +R+ W    L  +   A G+L         ALP RAE    TP         ++ERGR +
Sbjct: 760  KRSKWWFGSLAGVFGAALGMLAT-------ALPWRAEIAPVTPPGVGSWSAAMLERGRQV 812

Query: 57   ALAGNCAGCHTTRGGRPYAGGLPIETPFGTIYSSNLTPDAQTGIGSWSSAHFWRAMHNGR 116
            A AG+CA CHT  GG+  AGGL ++TPFGT+YS+N+TPD +TGIG WS A F RAM  G 
Sbjct: 813  AAAGDCAVCHTVSGGKANAGGLAMDTPFGTLYSTNITPDPETGIGRWSFAAFERAMREGI 872

Query: 117  SKDGRLLYPAFPYPNFTKVTREDSDAIYAYLRSVEPASEQNRAHRLRFPYDTQAALAVWR 176
            S+DGR LYPAFPY +F  +   D  A+YAYL S  P  ++  A+++RFP++ +  +A W 
Sbjct: 873  SRDGRHLYPAFPYTSFRNINDADMQALYAYLMSQTPVRQEAPANQMRFPFNQRPLMAGWN 932

Query: 177  ALSFKPEAFVANAGKPAEWNRGAYLVDGLGHCIACHGSRNSLGATDTRLG-LSGGLIAVE 235
            A   +   +  +  + A+WNRGAYLVDGLGHC ACH  RN +GA       L+GG+  V+
Sbjct: 933  ARFLQRGEYQPDPQRSAQWNRGAYLVDGLGHCTACHSPRNLMGAEKGGSSYLAGGM--VD 990

Query: 236  NWYAPSLTDPHEAGLADWPSADVVALLKTGVAPR-GSVMGPMADVVFRSTQYLSDSDLTA 294
             W AP+L    ++    W   ++   L TG + + G   GPM  VV      L  SD+ A
Sbjct: 991  GWEAPALNALGKSS-TPWSEDELFNYLSTGFSEKHGVAAGPMGPVV-SELATLPKSDVRA 1048

Query: 295  MASYLKDLPDVPKTEEPAGTKAPIRRDAGTMARGAKIYDQRCAYCHGD-QGQGAVGAYPP 353
            +A YL  L   P  +  A   AP      +++ G +++   C  CH D  G    G  P 
Sbjct: 1049 IAHYLSSLEGEP--QALAANAAPQVDTHVSLSNGERVFKGACLGCHSDGLGPKLFGVSPS 1106

Query: 354  LAGNRAVNMARPTNLVQVIAHGGFLPTTAGNPRPYGMPPFGQTLDAADVAAVLTYIRGSW 413
            +A N  V+   P NL++V+ HG  +PT A     Y MP F  +L    VA +  Y+R  +
Sbjct: 1107 MAVNSNVHSDLPDNLLRVVLHG--IPTPATRDLGY-MPGFKDSLSDRQVADLAAYLRHRF 1163

Query: 414  GND 416
              D
Sbjct: 1164 AAD 1166