Pairwise Alignments

Query, 1038 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

Subject, 1008 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

 Score =  379 bits (974), Expect = e-109
 Identities = 275/1019 (26%), Positives = 500/1019 (49%), Gaps = 51/1019 (5%)

Query: 8    IRNPIPAVMLFVLLTFGGLLSFNAMKVQNFPDIDLPTVTVSASLPGAAPSQLETDVARKL 67
            IR P+ A+++ +L+   G  +++ + ++ +P ++   +TV+ + PGA    ++  + + L
Sbjct: 8    IRRPVLAMVVSLLIVLLGFQAYSTLPLRQYPSMENALITVTTAYPGANAETIQGYITQPL 67

Query: 68   ENSIATVQGLKHITTKVQDGAATLIVEFRLEKPVQEAVDDVRSAVQRVRADLPADVRDPV 127
            + S+A+ +G+ ++T+  +   + + +  R+         ++ +    V+  LP D  DPV
Sbjct: 68   QQSLASAEGIDYMTSVSRQNFSVISIYARIGSNSDRLFTELLAKANEVKNKLPQDAEDPV 127

Query: 128  VTKLDLAGQPVLAFTIASSQMDNEALSWYVDNDVTKRLLALPGVGAVNRVGGATRQVHVD 187
            ++K       ++  + +S Q+ N  ++ Y+   +  +L  LPG+     +G     + + 
Sbjct: 128  LSKEAADASALMYISFSSGQLSNPQITDYLSRVIQPKLATLPGMAEAEILGNQVFAMRIW 187

Query: 188  LDPVKLQALGASAGDISRQLRQVQTESAGGRFDLGGSEQPVRTMATVKSADQLADMQIVL 247
            LDPVKL   G SA DI+  +R+    SA G          +     +KSA+    + +  
Sbjct: 188  LDPVKLAGFGLSASDITDAVRRYNFLSAAGEVKGEFVVTSINANTDLKSAEAFGAISVKT 247

Query: 248  TDGRRIRLDQVARISDTIAEPRAAALLNGKPVVGFEVARSRGASEVEVGHAVQKALADMR 307
                R+ L  VAR+        A +   G P V   +  +  A+ ++V   V+K L ++ 
Sbjct: 248  DGDSRVLLRDVARVEMGAENYNAISSFGGTPSVYIGIKATPSANPLDVIKEVRKILPELE 307

Query: 308  AQRP-DIELTEAFNFVDPVEEEYNGSLHLLYEGAILAVVVVWLFLRDWRATFVSAVALPM 366
            +Q P +++   A++    ++   N  +  L+E  ++ +VVV+LFL   R+  +  + +P+
Sbjct: 308  SQLPPNLKAEIAYDATLFIQASINEVVKTLFEAVLIVIVVVFLFLGALRSVVIPVITIPL 367

Query: 367  SVIPAFIGMHLLGFSVNVISLLALSLVVGILVDDAIVEVENIVRHLRMGKTPYQAAMEAA 426
            S+I     M L+G+S+N+++LLA+ L +G++VDDAIV VENI RH+  GKTP  AA+E A
Sbjct: 368  SMIGVLFFMQLMGYSINLLTLLAMVLAIGLVVDDAIVVVENIHRHIEEGKTPLDAALEGA 427

Query: 427  DEIGLAVIATTFTLIAVFLPTAFMSGIAGKFFKQFGWTAALAVFASLVVARVLTPMMAAY 486
             EI L V++ T TL AV+ P  F+ G+ G  FK+F  T A AV  S +VA  L+PMM A 
Sbjct: 428  REIALPVVSMTITLAAVYAPIGFLEGLTGALFKEFALTLAGAVIISGIVALTLSPMMCAL 487

Query: 487  MLK----PVVTAETEPGWLRWYMRAVEWSTHNRFKTMVLATLFFFGSLAMIPL---LKTG 539
            +L+    P   A           R  +   H    T  +  +F    L +IP+       
Sbjct: 488  LLRHDENPSGLAHRLDRMFDGLKRRYQRMLHGTLNTRPVVIVFALIVLCLIPVFLKFTQS 547

Query: 540  FIPPDDNSQTQVYLSLAPGST-LAQTTAAAEETRRRVMQIPHVKSVYTTVAGGSAGGDPF 598
             + PD++      ++ AP  T L       +E        P   S              F
Sbjct: 548  QLAPDEDQGIIFMIASAPQPTNLEYLNTYTDEFINIFKAFPEYYS-------------SF 594

Query: 599  ASFGTPETRKATLTIKLDPRGDRPRKQV-IENQIRSALETLPGVR----STVGLGGSGEK 653
               G    +       L P  +R R Q+ I  +++  LE +PG++    +   L G+GE 
Sbjct: 595  QINGFNGVQSGIGGFLLKPWNERDRTQMQILPEVQKRLEQIPGLQVFGFNLPSLPGTGEG 654

Query: 654  Y---ILALTGEDPVALASAASAVEKDLRTIPGLGNITSTASLVRPEIAVRPDFARAADLG 710
                 +  T  D  +L   A+ V+K          +    +  +PE+ V  D A+AA +G
Sbjct: 655  LPFGFVINTANDYESLLEVANRVKKRAMESGKFAFVDIDLAFDKPEVVVDIDRAKAAQMG 714

Query: 711  VTSSAIAETLRVATLGDYDQSLAKLNLAQRQVPIVVKLEDSARQDIDLLGRLSVPGTRGP 770
            V+   +  TL  ATL   +  + +  L  R   ++ ++E + R + + L    V   +G 
Sbjct: 715  VSMQDLGGTL--ATL-LAEAEINRFTLDGRSYKVIAQVERTYRDNPEWLNNYYVKNAQGE 771

Query: 771  VM-LNQVASLSMEGGPAVIDRYDRSRNV---NFEIELSGVGLGDAKAAVQKLPSIQKLPP 826
            V+ L+ + +++    P  ++++ +  +     F I    V +G+A   V+++ +I++ PP
Sbjct: 772  VLPLSTLITVTDRARPRQLNQFQQLNSALISGFPI----VSMGEAIDTVRQI-AIEETPP 826

Query: 827  GVRIAEVGDAEVM----TELFASFGLAMLTGVLCIYIVLVLLFKDFLHPVTILCALPLAL 882
            G      G +       T L+A+FGLA+      I++VL   F+ F  P+ IL  +PL++
Sbjct: 827  GYAFDYSGASRQFIQEGTALWATFGLAL----AIIFLVLAAQFESFRDPLVILVTVPLSI 882

Query: 883  GGAFVGLLIGQKALSMPSLIGLIMLMGIATKNSILLVEYAIVARRDHGMSRWDALRDACH 942
             GA + L +G  ++++ + +GL+ L+G+ +K+ IL+VE+A   R+D G++   A+ +A  
Sbjct: 883  CGALIPLFLGWSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRKDKGLTPRQAVEEAAA 942

Query: 943  KRARPIIMTTLAMGAGMLPIAVGFGSADSSFRSPMAMAVIGGLITSTVLSLLVVPAVFT 1001
             R RP++MTT AM  GM+P+ +  G+   S R  + M +  G+   T+ +L V+P V+T
Sbjct: 943  IRLRPVLMTTAAMVFGMVPLILATGAGAVS-RFDIGMVIATGMSIGTLFTLFVLPCVYT 1000