Pairwise Alignments

Query, 1038 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

Subject, 1035 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

 Score =  409 bits (1050), Expect = e-118
 Identities = 288/1036 (27%), Positives = 500/1036 (48%), Gaps = 47/1036 (4%)

Query: 1    MNVSAWSIRNPIPAVMLFVLLTFGGLLSFNAMKVQNFPDIDLPTVTVSASLPGAAPSQLE 60
            MN+S   IR P+  ++L + +   G +SFN + V   P ID P + VSASLPGA+P  + 
Sbjct: 1    MNLSGPFIRRPVATMLLSLAIMLLGGVSFNLLPVSPLPQIDFPVIVVSASLPGASPEVMA 60

Query: 61   TDVARKLENSIATVQGLKHITTKVQDGAATLIVEFRLEKPVQEAVDDVRSAVQRVRADLP 120
            + VA  LE S  ++ G+  +++    G+  +I+ F  ++ +  A  +V++A+   R  LP
Sbjct: 61   STVATPLERSFGSIAGITTMSSSSSQGSTRVILAFDSDRDINGAAREVQAAINASRNLLP 120

Query: 121  ADVRD-PVVTKLDLAGQPVLAFTIASSQMDNEALSWYVDNDVTKRLLALPGVGAVNRVGG 179
            + +R  P   K++ +  P++  ++ S  +    L       +++ L  +PGVG V   G 
Sbjct: 121  SGMRSMPTYKKINPSQAPIMVLSLTSDVLQKGQLYDLASTILSQSLSQVPGVGEVQIGGS 180

Query: 180  ATRQVHVDLDPVKLQALGASAGDISRQLRQVQTESAGGRFDLGGSEQPVRTMATVKSADQ 239
            +   V ++L+P  L   G +  D+   +         G  +       ++    ++ A  
Sbjct: 181  SLPAVRIELEPKALDQYGVALDDVRNTIANANQRRPKGSLEDSQRNWQIQANDQLEKAKD 240

Query: 240  LADMQIVLTDGRRIRLDQVARISDTIAEPRAAALLNGKPVVGFEVARSRGASEVEVGHAV 299
               + I   +G  +RL  VA+ISD + +   +   N +P V   + R  GA+ +E    +
Sbjct: 241  YEPLLIRYQNGAALRLGDVAKISDGVEDRYNSGFFNNEPAVLLVINRQSGANIIETVRQI 300

Query: 300  QKALADMRAQRPD-IELTEAFNFVDPVEEEYNGSLHLLYEGAILAVVVVWLFLRDWRATF 358
            +  L  ++A  P  ++L+ A +    +    + +   L     L ++VV+LFL ++RA+ 
Sbjct: 301  KAQLPALQAVLPSSVKLSLAMDRSPVITATLHEAEMTLLIAVGLVILVVYLFLGNFRASL 360

Query: 359  VSAVALPMSVIPAFIGMHLLGFSVNVISLLALSLVVGILVDDAIVEVENIVRHLRMGKTP 418
            +  +A+P+S++  F  M+L GFS+N  SL+AL L  G++VDDAIV +ENI RH+  G  P
Sbjct: 361  IPTLAVPVSLVGTFAVMYLYGFSLNNFSLMALILATGLVVDDAIVVLENISRHIDEGVPP 420

Query: 419  YQAAMEAADEIGLAVIATTFTLIAVFLPTAFMSGIAGKFFKQFGWTAALAVFASLVVARV 478
             +AA   A E+G  +++   +L+AVFL   FM GI    F++F  T + A+  SL+V+  
Sbjct: 421  MKAAYLGAQEVGFTLLSMNVSLVAVFLSILFMGGIVTNLFREFSITLSAAIIVSLIVSLT 480

Query: 479  LTPMMAAYMLKPVVTAETEPGWLRW-----------YMRAVEWSTHNRFKTMVLATLFFF 527
            LTPM+ A  LKP V  +   G  RW           Y  +++W   +R  T++   L   
Sbjct: 481  LTPMLCARWLKPHVKGQM-TGLQRWSQKINDRMVAGYATSLDWVLRHRRLTLLSLLLTIG 539

Query: 528  GSLAMIPLLKTGFIPPDDNSQTQVYLSLAPGSTLAQTTAAAEETRRRVMQIPHVKSVYTT 587
             ++A+  ++   F+P  D  Q   ++    G + +      E  R+ V++ P V SV   
Sbjct: 540  LNVALYVVVPKTFMPQQDTGQLIGFVRGDDGLSFSVMQPKMETFRKAVLKDPAVLSVAGF 599

Query: 588  VAGGSAGGDPFASFGTPETRKATLTIKLDPRGDRP-RKQVIENQIRSALETLPGVR---- 642
            + G +             T  A + ++L P  +R    Q +  ++R  +  +PG R    
Sbjct: 600  IGGNNG------------TNNAVMLVRLKPISERKISAQAVIERLRKDVPLVPGGRLFLM 647

Query: 643  --STVGLGGSGE----KYILALTGEDPVALASAASAVEKDLRTIPGLGNITSTASLVRPE 696
                +  GGS +    +Y   L   D  AL      V   LR +P L  I +       +
Sbjct: 648  ADQDLQFGGSRDQTSAQYSYILQSGDLAALRLWYPKVVAALRELPELTAIDAREGRGAAQ 707

Query: 697  IAVRPDFARAADLGVTSSAIAETLRVATLGDYDQ-SLAKLNLAQRQVPIVVKLEDSARQD 755
            + +  D  +A  LG+    +   L  A    Y Q  ++ +  +  Q  +V+++     QD
Sbjct: 708  VTLIVDRDQAKRLGIDMDMVTSVLNNA----YSQRQISTIYDSLNQYQVVMEVNPRYAQD 763

Query: 756  IDLLGRLSV---PGTRGPVMLNQVASLSMEGGPAVIDRYDRSRNVNFEIELSGVGLGDAK 812
               L ++ V    G R P+        S+       +    S N+ F++   GV +    
Sbjct: 764  PITLNQMQVITADGARVPLSTIAHYENSLADDRVSHEGQFASENIAFDM-APGVTVEQGT 822

Query: 813  AAVQKLPSIQKLPPGVRIAEVGDAEVMTELFASFGLAMLTGVLCIYIVLVLLFKDFLHPV 872
            AA+++  +   LP  V     G A+            +L  ++ +Y+VL +L++ ++HP+
Sbjct: 823  AAIERAIAKVGLPEDVIAKMAGTADAFAATQKGQPFMILGALVAVYLVLGILYESYIHPL 882

Query: 873  TILCALPLALGGAFVGLLIGQKALSMPSLIGLIMLMGIATKNSILLVEYAIVARRDHGMS 932
            TIL  LP A  GA + + +     S+ SL+GL +L+G+  KN+IL+++ A+   R  GMS
Sbjct: 883  TILSTLPSAGVGAMLAIYLTGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERHDGMS 942

Query: 933  RWDALRDACHKRARPIIMTTLAMGAGMLPIAVGFGSADSSFRSPMAMAVIGGLITSTVLS 992
              +++R AC  R RPI+MTTLA   G LP+ +G G   +  R P+ + +IGGL+ S +L+
Sbjct: 943  PLESIRSACLLRLRPILMTTLAAILGALPLLLGAGDG-AEMRRPLGLTIIGGLVFSQILT 1001

Query: 993  LLVVPAVFTYVDDIEH 1008
            L   P V+ Y+D   H
Sbjct: 1002 LYTTPVVYLYLDRARH 1017