Pairwise Alignments

Query, 673 a.a., Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 from Variovorax sp. SCN45

Subject, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

 Score =  346 bits (888), Expect = 2e-99
 Identities = 234/588 (39%), Positives = 328/588 (55%), Gaps = 32/588 (5%)

Query: 66  VLLRLGRFAKPYRKQLIL---GFVLTLISTAATL--VPPYLTIPLMDDILIPFQNGQKID 120
           +  RL  + KPY    +L   GFV+   ST   L  +  Y    L +   + F N   + 
Sbjct: 16  IYFRLLSYVKPYVGIFLLSIVGFVI-FASTQPMLAGILKYFVDGLSNPEAVLFPNVPYLR 74

Query: 121 TMRVGLYLGGLLVAALVGW-GLG-WARTYLLALVSERIGADLRTTTYEHLLTLPLDYFGG 178
            +++ L    LL+  +  W GLG +   Y LA VS  +  DLR   +  LL LP  YF  
Sbjct: 75  DLQL-LQAVPLLIILIAAWQGLGSFLGNYFLAKVSLSLVHDLRVALFNKLLVLPNRYFDN 133

Query: 179 KRTGDLMARI--------GSETDRINVFLSLHALDFANDVLMIVMTAVILISINPLLAVV 230
             +G L++RI        G+ TD I V +         + L +V     L+ +N  L +V
Sbjct: 134 HNSGHLISRITFNVTMVTGAATDAIKVVI--------REGLTVVFLFAYLLWMNWHLTLV 185

Query: 231 TLVPLPFIAWMIHVVRDRLRTGFEKIDRVWSEVTNVLADTIPGIRVVKAFAQERREAERF 290
            +  LP IA M+ +   + R   +KI     +VT+V ++TI G RVV++F  E  E +RF
Sbjct: 186 MVAILPVIAVMVSIASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQQRF 245

Query: 291 RVANAYNLQVNDKLNRTWSLFTPTVSLLTEIGLLVVWAFGIWQVARGSITVGVLTAFIAY 350
             A+  N     ++ +T SL+TP + L+    +  +    ++   RG  T G L A+I  
Sbjct: 246 GQASQSNTDKQLRMTKTGSLYTPMLQLVIYSAMAALMFLVLF--LRGDSTAGDLVAYITA 303

Query: 351 IGRFYTRLDSMSRIVSVTQKAAAGAKRIFDILDHVSNVPEPANPVKVERVQGRIEMSGLG 410
            G     +  +S + S  QK  AGA+ IF+ LD    V      V+ ERV+GR+E+  L 
Sbjct: 304 AGLLPKPIRQLSEVSSTIQKGLAGAESIFEQLDEAPEVD--TGTVEKERVEGRLEVRNLS 361

Query: 411 FRYGS--RAVIHDLDLVIEPGEMIGLVGHSGSGKSTLVNLICRFYDVTDGAIKVDGTDIR 468
           F Y    R V+ D+  V EPG+MI LVG SGSGKSTL  LI RFY    G I +DG +I 
Sbjct: 362 FTYPGTEREVLSDISFVAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIE 421

Query: 469 RFAVADYRRHVGLVLQEPFLFFGTIAQNIAYGK-PDATREEIVAAARAAHAHDFILRLQH 527
            + + + RRHV  V Q   LF  T+A NIAYG    A R +I AAA  A+A +F+ RL  
Sbjct: 422 HYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPK 481

Query: 528 GYDSLVGERGQGLSGGERQRISIARALLIDPRILILDEATSAVDTETEKEIQKALDNLVQ 587
           G+D+ VGE G  LSGG+RQR++IARALL +  +LILDEATSA+DTE+E+ IQ ALD+++Q
Sbjct: 482 GFDTEVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQ 541

Query: 588 GRTTIAIAHRLSTLRKADRLVVMDRGEVVEVGPHDALMAKQGAYWRLY 635
           GRTT+ IAHRLST+ KAD+++VMD+G +VE G H  L+A  G Y RL+
Sbjct: 542 GRTTLVIAHRLSTIEKADQILVMDQGRLVERGTHTELLAANGHYARLH 589