Pairwise Alignments

Query, 508 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

 Score =  171 bits (434), Expect = 4e-47
 Identities = 132/482 (27%), Positives = 218/482 (45%), Gaps = 30/482 (6%)

Query: 12  LPLGFGLGLSGCALNRPPAQVEAPTPAQWHAPLPHGGSLASLADWWRQLDDPLLVELIAA 71
           LP+   L L+GC+L     + EAP  A+W     H G      DW   + DP+L +L+  
Sbjct: 9   LPIVLALTLAGCSLTPTYQRPEAPVAAEWGDAAGHTGHSVEQLDWQAFIVDPVLRQLVGT 68

Query: 72  AEAASPNVASAAARVAEARFTRVQTGAALLPSLDGTASASRGTAGIASGAPSGGSASSSS 131
           A   + ++      + +AR       A  +P L+ +AS +R    + +   S G    SS
Sbjct: 69  ALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNR--QHLPAALSSDGREGVSS 126

Query: 132 SSSLGATTPITTLQVGLQSKWEVDLFGRLRADRDAAQAKLGSADAKWHDARVSVAAETAN 191
           +  +G + P          ++EVDLFGR+++  DAA  +  + +     AR+++ AE + 
Sbjct: 127 TYQVGLSLP----------EYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQ 176

Query: 192 AYFAERACQQQLRVAESDTRSRAETSRLNDLSMRAGFTAPAD----AALARASAADASGR 247
           AY A    +++  +      SR ++  L      AG     D      L   S A+    
Sbjct: 177 AYLALDGAERRQALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVT 236

Query: 248 LTQQRAQCAVQRKALVALSGIDESTLEQKLAASPAQR---ALPAVGSIASVPAEAISQRP 304
           + QQR        ALV L G  E+       A PA+R    +     +   P+  I +RP
Sbjct: 237 VRQQRQ----AYNALVLLLGSAEAA-----KAMPAERPDEPMVLNDIVPGAPSALIERRP 287

Query: 305 DVYSAELGVASASADVGSAEAERYPKLTISGSIGRTQYRVSGL-QQSLENWTIGPVSLSV 363
           D+ +AE  + + +AD+G+A A  +P+++++GS G    ++SGL      +W   P  LS+
Sbjct: 288 DILAAEHRLRARNADIGAARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMP-QLSL 346

Query: 364 PLLDGGSRKANADAAKARYAEAVSIYRANVRQAVREVEEALVNLDATDGRANDADTAVKN 423
           PL D G  +A    A+AR   AV+ Y   ++ A REV +AL   D               
Sbjct: 347 PLFDAGRNRAGLSLAEARKDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADT 406

Query: 424 YQASFDATQARYSSGLASLFELEDSRRTLFAAQTARVSLQRERTEAWVALYRSMGGGWSR 483
            + +    +ARY  G+ +     D++R  +  + A +    +R  A V L+R++GGGW  
Sbjct: 407 SRETLTLAKARYEGGVDNHLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGWPS 466

Query: 484 PG 485
            G
Sbjct: 467 KG 468