Pairwise Alignments

Query, 345 a.a., Galactofuranose ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  142 bits (358), Expect = 1e-38
 Identities = 119/331 (35%), Positives = 179/331 (54%), Gaps = 20/331 (6%)

Query: 20  RGAGSKRGLNPKYLPLA-ATISLFVLVATLGSVFYD-GFFSAQVFLNLLIDNAFLIVVAV 77
           R +G+  GL   YL LA A +++ VL + L S F+  G FS     N + D   L+V+AV
Sbjct: 15  RRSGTYFGLGT-YLGLAGALLAMIVLFSFLSSHFWSYGTFST--LANQIPD---LMVLAV 68

Query: 78  GMTFVILSGGIDLSVGSVIAL-TTMVSASLVEKHGWSPGVVIPLVLVMGTA--FGAFMGL 134
           GMTFV++ GGIDLSVGSV+AL  + VS +++   GW  GV+   +L M  A   G+  G 
Sbjct: 69  GMTFVLIIGGIDLSVGSVLALAASTVSVAIL---GWGWGVLPSALLGMAVAALAGSITGG 125

Query: 135 LIERYRLQPFIVTLAGMFLARGLCYLISIDSISITNEFYSEVSQIRIPIWGEASVSISAV 194
           +   +R+  FIV+L  + +ARGL Y  +    +   + Y+  S    P+     VS + +
Sbjct: 126 VTVAWRIPSFIVSLGVLEMARGLAYQFTDSRTAYIGDAYAWFSN---PV--AFGVSPAFI 180

Query: 195 IAVAVLLAAVFIAHCTPFGRAVYAIGGSEHSAVLMGLPVRRTLIGVYTLSGFCSALAGVI 254
           IA+ V++ A  +   T FGR +  IG +E +  L G+  R   + V+ L G  + LA + 
Sbjct: 181 IALLVIVLAQLVLTRTVFGRYLIGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALF 240

Query: 255 FTFYMLSGYGLHAVGLELDAIAAVVIGGTLLTGGVGYVAGTLFGVLMLGIIQTLISFDGT 314
               + +       GLEL  IAAVVIGGT L GG G V  T FGVL++ ++   ++  G 
Sbjct: 241 QISRLEAADPNAGSGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGA 300

Query: 315 LSSWWTRIVVGALLFVFCLLQRFFTSRAPRR 345
            S    RI+ GA++ +  +L  + + RA RR
Sbjct: 301 -SEPTKRIITGAVIVIAVVLDTYRSRRAGRR 330