Pairwise Alignments

Query, 523 a.a., L-arabinose ABC transporter, ATP-binding protein AraG from Variovorax sp. SCN45

Subject, 505 a.a., ABC transporter, nucleotide binding/ATPase protein (ribose) from Agrobacterium fabrum C58

 Score =  410 bits (1054), Expect = e-119
 Identities = 224/503 (44%), Positives = 328/503 (65%), Gaps = 13/503 (2%)

Query: 8   ADAGVILEMRGITKTFPGVKALSNVNLGVRAGEIHAVVGENGAGKSTLMKVLSGVYPCDS 67
           A+  V+L +  I+K FPGVKALSNV+  +R+GE+HAV GENGAGKSTLMK++SGVY    
Sbjct: 4   AERSVLLRLENISKEFPGVKALSNVHFDLRSGEVHAVCGENGAGKSTLMKIISGVY--QP 61

Query: 68  YEGEIRFEGEVRRFRGIADSEKLGIIIIHQELALVPLLSIAENIFLGNEITRGGVIDWFA 127
            EG I  +GE  ++     SE  GI IIHQEL LVP LS+AENI+L  E  RG ++D   
Sbjct: 62  SEGTILHKGEKVQYASPLQSEAAGIAIIHQELNLVPHLSVAENIYLAREPRRGFLVDRKK 121

Query: 128 AYARTRELLAKVGLKEPPTTLVTDLGVGKQQLVEIAKALAKEVKLLILDEPTASLNEKDS 187
                +  L ++G+   P  LV  L V + Q+VEIAKAL+ + ++LI+DEPT+SL E+++
Sbjct: 122 LRLDAKRCLDRLGVDINPDQLVRSLSVAQCQMVEIAKALSLDAEVLIMDEPTSSLTEQET 181

Query: 188 DALLMLLLELKRQGIASILISHKLNEIAKVADSVTVLRDGATVETMDCRAQPISEDRIIR 247
             L  ++ +LK  G+  + ISH+L+E+A++ D VT+LRDG  + T D  +  I+ D I+ 
Sbjct: 182 RLLFKVIRDLKASGVGIVYISHRLDEMAEIVDRVTILRDGRYISTDDFAS--ITVDDIVT 239

Query: 248 GMVGRDMAHRYPQRAPKIGETVFEVRDWRVHHALHADREQIKGVSLNVRQGEIVGIAGLM 307
            MVGR +  ++P+R  +  + +    +    + + +D      VS ++R+GEI+G AGLM
Sbjct: 240 RMVGRSLEDKFPERTSRPTDDILFSVEGLTRNGVFSD------VSFSLRRGEILGFAGLM 293

Query: 308 GAGRTELAMSVFGRSYGQRISGSVLMHGKPVDVSTVRKAIDHGIAYVTEDRKGLGLVLEE 367
           GAGRTE+A ++FG       +G ++ +G+ + + + + AI+ GIAY++EDRK  GL ++ 
Sbjct: 294 GAGRTEVARAIFGAD--PLDAGKIVFNGRELSIGSPQDAIEEGIAYLSEDRKSDGLAIKM 351

Query: 368 DIRRNISLANLEAVSES-AVIDTGREFKVANEYRKALNIRCSGVEQLVVNLSGGNQQKVV 426
            +  N +LANL  VS    +ID  +   VA  Y   LNIR   ++Q V  LSGGNQQK++
Sbjct: 352 SVAANTTLANLGEVSNRFGLIDFKKHDDVAKRYVDLLNIRTPSIDQTVRLLSGGNQQKII 411

Query: 427 LSKWLFTKPELLILDEPTRGIDVGAKYEIYTIIDQLASEGKGILMISSELPELLGMCDRI 486
           + KWLF +  +L  DEPTRGIDVGAK+ IY I+D+LA++G G+++ISSELPE+LG+ DRI
Sbjct: 412 IGKWLFRQSRVLFFDEPTRGIDVGAKFAIYKIMDELAAQGIGVILISSELPEILGLTDRI 471

Query: 487 YVMNEGRFVAEFPVAEASQERIM 509
            V ++GR       A+ +QE IM
Sbjct: 472 AVFHQGRITGVLETAKTNQEEIM 494



 Score = 74.3 bits (181), Expect = 1e-17
 Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 22/233 (9%)

Query: 288 IKGVSLNVRQGEIVGIAGLMGAGRTELAMSVFGRSYGQRISGSVLMHGKPVDVSTVRKAI 347
           +  V  ++R GE+  + G  GAG++ L M +    Y Q   G++L  G+ V  ++  ++ 
Sbjct: 25  LSNVHFDLRSGEVHAVCGENGAGKSTL-MKIISGVY-QPSEGTILHKGEKVQYASPLQSE 82

Query: 348 DHGIAYVTEDRKGLGLVLEEDIRRNISLANLEAVSESAVIDTGREFKVANEYRKALNIRC 407
             GIA + ++   L LV    +  NI LA           +  R F V  +  +    RC
Sbjct: 83  AAGIAIIHQE---LNLVPHLSVAENIYLAR----------EPRRGFLVDRKKLRLDAKRC 129

Query: 408 S---GVE----QLVVNLSGGNQQKVVLSKWLFTKPELLILDEPTRGIDVGAKYEIYTIID 460
               GV+    QLV +LS    Q V ++K L    E+LI+DEPT  +       ++ +I 
Sbjct: 130 LDRLGVDINPDQLVRSLSVAQCQMVEIAKALSLDAEVLIMDEPTSSLTEQETRLLFKVIR 189

Query: 461 QLASEGKGILMISSELPELLGMCDRIYVMNEGRFVAEFPVAEASQERIMHAIV 513
            L + G GI+ IS  L E+  + DR+ ++ +GR+++    A  + + I+  +V
Sbjct: 190 DLKASGVGIVYISHRLDEMAEIVDRVTILRDGRYISTDDFASITVDDIVTRMV 242