Pairwise Alignments

Query, 321 a.a., Galactofuranose ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 318 a.a., galactofuranose ABC transporter substrate-binding protein YtfQ from Escherichia coli ECRC62

 Score =  303 bits (776), Expect = 4e-87
 Identities = 167/320 (52%), Positives = 220/320 (68%), Gaps = 9/320 (2%)

Query: 3   MNRRTLNTALAAAALGSMLPVSVFAQKKLVLGFAQVGAESEWRTANTESIKSSAKDAGIE 62
           M +R L  +  +AA+ SM   +      L +GF+QVG+ES WR A T   KS A+  GI 
Sbjct: 1   MWKRLLVVSAVSAAMSSMALAA-----PLTVGFSQVGSESGWRAAETNVAKSEAEKRGIT 55

Query: 63  LKFSDAQQKQENQIKAIRSYIAQKVDVIAFSPVVESGWETVLREAKAAKIPVVLTDRSVS 122
           LK +D QQKQENQIKA+RS++AQ VD I  +PVV +GWE VL+EAK A+IPV L DRS+ 
Sbjct: 56  LKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSID 115

Query: 123 TKDDSLYVTFMGSDFIEEGRKAGRWLVEKMKDQKGDVNIVELQGTVGSAPAIDRKKGFEE 182
            KD SLY+T + +D I EG+  G WLV+++  +    N+VELQGTVG++ AIDRKKGF E
Sbjct: 116 VKDKSLYMTTVTADNILEGKLIGDWLVKEVNGK--PCNVVELQGTVGASVAIDRKKGFAE 173

Query: 183 IIKADPKFKIIRSQTGDFTRAKGKEVMEAFLKAD--GKKINVLFAHNDDMAIGAIQAIEE 240
            IK  P  KIIRSQ+GDFTR+KGKEVME+F+KA+  GK I +++AHNDDM IGAIQAI+E
Sbjct: 174 AIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKE 233

Query: 241 AGLKPAKDIVIISIDGVKGAFEAMIAGKLNVSVECSPLLGPQLMQAVKDIKDGKTLPKRI 300
           AGLKP KDI+  SIDGV   ++AMI G+ N SVE +P +      A++  K   T+P+++
Sbjct: 234 AGLKPGKDILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPAFDALEKYKKDGTMPEKL 293

Query: 301 VTVESIFPMEVAAKEFPNRK 320
              +S   +   AKE   +K
Sbjct: 294 TLTKSTLYLPDTAKEELEKK 313