Pairwise Alignments

Query, 308 a.a., Putative ROK-family transcriptional regulator from Variovorax sp. SCN45

Subject, 291 a.a., putative NAGC-like transcriptional regulator (VIMSS) from Escherichia coli BW25113

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 81/267 (30%), Positives = 123/267 (46%), Gaps = 40/267 (14%)

Query: 5   VDIGGTKVAVSLSPSSEAPLVGRRSEPTAKTGDNDAVAVQIIRMIEEVCAEQGVDPASID 64
           +DIGGTK+A +L   ++  +  RR  PT  +   +A+   +  ++  +        A   
Sbjct: 6   IDIGGTKLAAALI-GADGQIRDRRELPTPASQTPEALRDALSALVSPL-------QAHAQ 57

Query: 65  RVGVSSTGPFELHDGLVELATPNICGGIAGPSRGLPNSWMTAIVEAPLVKRFGSVR---- 120
           RV ++STG   + DG +    P+  GG+               +  PLVK    +     
Sbjct: 58  RVAIASTGI--IRDGSLLALNPHNLGGL---------------LHFPLVKTLEQLTNLPT 100

Query: 121 -VENDAVAALEAERHWGALKG-LDNCAYATWSTGVGVGLCVDGRALRGKNGNAGHAGHSF 178
              NDA AA  AE  + AL G + +  + T STGVG G+    + L G  G AGH GH+ 
Sbjct: 101 IAINDAQAAAWAE--FQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTL 158

Query: 179 VVDDTSGALCGCGNYGDVEALVSGSSIE-----HRFGQSAAELFNAASAGEPEALEIAEA 233
              D  G +CGCG  G VEA+ SG  I         G  A  +F  A  G+ +A ++   
Sbjct: 159 A--DPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADAKTIFTRAGQGDEQAQQLIHR 216

Query: 234 LCRVVGRMLYNMVITLDLQRISLGGSV 260
             R + R++ ++  T D Q + +GGSV
Sbjct: 217 SARTLARLIADIKATTDCQCVVVGGSV 243