Pairwise Alignments

Query, 395 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 415 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score = 90.9 bits (224), Expect = 6e-23
 Identities = 101/378 (26%), Positives = 163/378 (43%), Gaps = 26/378 (6%)

Query: 3   RRHLVALAALATCAAAVPAW--AQSNEIRIAHIYSKTGALEAYGKQTQTGLMMGLNYATE 60
           R  L  L A      A PA   AQ++ IRI      TG   A  K       + +    +
Sbjct: 15  RTVLAGLGAAGVGLIASPAIVRAQADTIRIGFPTPLTGPFGAEAKDQVKSAELAVKLVND 74

Query: 61  GTMMVNGKKIVVIEKDDQGKPDLGKSLLAAAYSDDKAALAIGPTASGVALAMLPVAEEYK 120
              +  G+K+ ++ +DD+       +        DK    +G  +S V LA+  V    +
Sbjct: 75  KGGIA-GRKVELLVRDDKLNAGEAATRTLELIEKDKVHAVVGALSSAVQLAVNEVTRA-R 132

Query: 121 KILLVEPAVADSITGDK-WNKYIFRTGRNSSQDAISNAVAVDKPGVTVATLAQDNAFGRD 179
            ++ V  + +D+I   K ++KY F    N      + A A  K G  VA L  D A+G +
Sbjct: 133 GVIYVSISQSDTINEVKDFSKYTFHEALNPHMTTAAVARATFKKGSKVALLGADYAYGHE 192

Query: 180 GVKAFGSALKK--AKLVHEEYLPPATTDFTAGAQRLIDKLKDQPGRKIIWIVWAGAGNPF 237
            ++ F  A  +  A++V E   P    D++    R I  LK  P    I        N  
Sbjct: 193 MMRGFKRAAGELGAEIVGEILHPFGAADYSTLMPR-IRSLK--PDILAICNFGRDQANSI 249

Query: 238 KIV-DLDLKRYGIEIATGGNILPAM-------AAYKALPGMEGAAYYYFGIPKN-PVNDA 288
           K   D  +K+  ++I     ++P +        A     G+ G A YY+ +    P   A
Sbjct: 250 KQANDFGMKKQ-MQI-----VVPVLLHNQRIAVAPDVFEGIIGGANYYWALENTIPSAKA 303

Query: 289 MVSAHYKEFKTPPDFFTAGGFSAAMAVVTALKKTGGDTNTNKLISTMEGMSFDTPKGKMT 348
              A+   + + P  + A GF+   A++ A+ K GG T+T+K++  +EG+ +D  KG   
Sbjct: 304 FNDAYKAAYGSLPTDYGAYGFTGVSALLLAMAKAGG-TDTDKVVEALEGLKYDVAKGPQY 362

Query: 349 FRKEDHQAMQSMYHFKIK 366
           FRK DHQ++QS+   K K
Sbjct: 363 FRKCDHQSVQSVLVLKSK 380