Pairwise Alignments

Query, 395 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 86/355 (24%), Positives = 138/355 (38%), Gaps = 35/355 (9%)

Query: 10  AALATCAAAVPAWAQSNEIRIAHIYSKTGALEAYGKQTQTGLMMGLNYATEGTMMVNGKK 69
           AA+     A  ++A ++ I+I     KTG +  YG     G    +         V+GK 
Sbjct: 9   AAMVLAGVASHSFA-ADTIKIGIAGPKTGPVTQYGDMQFIGAKQAIK-DINAAGGVDGKM 66

Query: 70  IVVIEKDDQGKPDLGKSLLAAAYS--DDKAALAIGPTASGVALAMLPVAEEYKKILLVEP 127
           +   E DD   P   K  +A A    +D     +G   S        + E+   I++   
Sbjct: 67  LEAKEYDDACDP---KQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPA 123

Query: 128 AVADSITGDKWNKYIFRT-GRNSSQD-AISNAVAVDKPGVTVATLAQDNAFGRDGVKAFG 185
           A +  IT   + K IFRT G +S+Q  A  N +A       VA L     +G     A  
Sbjct: 124 ATSPEITARGY-KLIFRTIGLDSAQGPAAGNYIADHVKPKVVAVLHDKQQYGEGIATAVK 182

Query: 186 SAL--KKAKLVHEEYLPPATTDFTAGAQRLIDKLKDQPGRKIIWIVWAGAGNPFKIVDLD 243
             L  K  K+   E L     DF++    +I KLK      + ++ + G      ++   
Sbjct: 183 QTLESKGTKVAVFEGLNAGDKDFSS----IIQKLKQN---NVDFVYYGGYHPELGLILRQ 235

Query: 244 LKRYGIEIATGG-----NILPAMAAYKALPGMEGAAYYYFGIPKN----PVNDAMVSAHY 294
            +  G++    G     N   +  A  A  G+         +PK+    P N  +V A  
Sbjct: 236 AQEKGLKAKFMGPEGVGNDSISQIAQNASEGL------LVTLPKSFDADPANKKIVDAIK 289

Query: 295 KEFKTPPDFFTAGGFSAAMAVVTALKKTGGDTNTNKLISTMEGMSFDTPKGKMTF 349
            + K P   F    +SA   +   +KK G D +T+K+   +   +F TP G ++F
Sbjct: 290 ADGKDPSGPFVFPAYSAVELIAQGIKKAGSD-DTDKVAEAIHKGTFKTPTGDLSF 343