Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 283 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  175 bits (444), Expect = 1e-48
 Identities = 104/292 (35%), Positives = 155/292 (53%), Gaps = 16/292 (5%)

Query: 30  WLTLTVAGLAMGMIIFIIASGLTLVFGLMDVLNFGHGVFIALGAFVASSVLGLMGDWTGS 89
           W+   +   A G I+F++A G +L+FGLM V N  HG    LG ++A+S +GL       
Sbjct: 3   WINGFLNSFAFGAILFLLAVGFSLIFGLMRVANLAHGALFMLGGYIATSAMGL------- 55

Query: 90  GELWRNLVAVFPAMLVAMAVAGAVGLAFERFIVRPVYGQHLKQILITMGGMIIGEELIKV 149
                       A+L A A     G   ER ++R + G+ L Q+L T+G   I  +   +
Sbjct: 56  --------GFAGAVLAAGAACAVFGGILERTLIRRLAGRELAQVLGTLGLAFIIADQCLL 107

Query: 150 IWGPAQIPLPLPEALRGSLLVGDAAISKYRLLAVAVGVVVFGVLAWTLGRTKIGLLIRAG 209
           +W    I  P PEALRG++  G      YRL  VA+ +V F  +   + RT +G  IRA 
Sbjct: 108 VWSGDPIAQPAPEALRGAVGFGGIVFPAYRLALVALALVAFVGIWALVERTTLGARIRAA 167

Query: 210 VQDREMVESLGYRIGRLFVGVFVVGSALAGLGGVMWGLFQQNLVPQMGAQVNVLIFIVII 269
           V DREM  ++G  + RLF  VF +G+ LAG+GG +      ++ P + +++  L  +V+I
Sbjct: 168 VDDREMARAMGIPVSRLFTTVFCLGAGLAGIGGALAAPI-MSVYPGLDSEMLPLALLVVI 226

Query: 270 IGGLGSTGGALIGALLVGLMTNYIGFLLPTLTQFASIFLMVAVLLWRPQGVY 321
           +GG+GS  GAL G+L++GL+  +   LLP L        MV VL  RPQG +
Sbjct: 227 LGGIGSLTGALAGSLVIGLVYTFGQMLLPDLAYVILFLPMVVVLAVRPQGFF 278