Pairwise Alignments

Query, 464 a.a., DNA repair protein RadA from Variovorax sp. SCN45

Subject, 455 a.a., DNA repair protein RadA from Pseudomonas simiae WCS417

 Score =  530 bits (1364), Expect = e-155
 Identities = 273/461 (59%), Positives = 344/461 (74%), Gaps = 9/461 (1%)

Query: 1   MAKDKTTFVCSECGGTSPKWLGKCPSCGAWNTLIEQAAGAAGGGPANNRFGTQFASLAGA 60
           MAK K  + C+ECG T PKW G+C  CGAWNTL E    + G      R G         
Sbjct: 1   MAKAKRMYGCTECGATFPKWAGQCTECGAWNTLTETMIESGGAAAPTGRAGWT----GQQ 56

Query: 61  SELATLSEIEATDVARTPTGLDELDRVLGGGIVSGGVTLIGGDPGIGKSTLLLQAVDALQ 120
           +++ TL+E+   ++ R  T   ELDRVLGGG+V G V LIGGDPGIGKST+LLQ + ++ 
Sbjct: 57  AQIKTLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCSIA 116

Query: 121 RAGQNALYVTGEESGSQVALRSKRLGLDHSQVQVLAEIQLEKIIATLDATRPAIAVIDSI 180
            +   ALYVTGEES  QVA+R++RLGL   Q++V+ E  +E IIAT    +P + VIDSI
Sbjct: 117 -SRMPALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIESIIATARIEKPKVMVIDSI 175

Query: 181 QTVYSDQLTSAPGSVAQVRECAAHLTRFAKTSGTAVVLVGHVTKEGALAGPRVLEHMVDT 240
           QT++++QL SAPG V+QVRE AA L R+AK SGTA+ LVGHVTKEGALAGPRVLEHMVDT
Sbjct: 176 QTIFTEQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDT 235

Query: 241 VLYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVTNPSAIFLSQHAEPVPGSV 300
           VLYFEG++    RL+RA+KNRFGAVNE+GVFAMT+RGLK V+NPSAIFL++  E VPGSV
Sbjct: 236 VLYFEGESDGRLRLLRAVKNRFGAVNELGVFAMTDRGLKEVSNPSAIFLTRAQEEVPGSV 295

Query: 301 VLVTLEGTRPMLVEIQALVDNGG-PSPRRLSVGLDRDRLAMLLAVLHRHAGVACMDQDVF 359
           V+ T EGTRPMLVE+QALVD+    +PRR+++GLD++RLAMLLAVLHRH G+   DQDVF
Sbjct: 296 VMATWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVF 355

Query: 360 VNAVGGVRISEPAADLAVMLAITSSLRGKPMPKGFIAFGEVGLAGEVRPAPRGQERLREA 419
           +N VGGV++ E A+DLA+M A+ SSLR +P+P   + FGEVGL+GEVRP P GQERL+EA
Sbjct: 356 LNVVGGVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEA 415

Query: 420 AKLGFSVAVVPKANAPRKGTKEIEGLTIHAVDRIEEAMDVV 460
           AK GF  A+VPK NAP++      G+TI  V R+E+A+D +
Sbjct: 416 AKHGFKRAIVPKGNAPKESP---PGITIIGVTRLEQALDAL 453