Pairwise Alignments

Query, 464 a.a., DNA repair protein RadA from Variovorax sp. SCN45

Subject, 460 a.a., DNA repair protein RadA from Magnetospirillum magneticum AMB-1

 Score =  419 bits (1078), Expect = e-122
 Identities = 238/469 (50%), Positives = 302/469 (64%), Gaps = 19/469 (4%)

Query: 1   MAKDKTT-FVCSECGGTSPKWLGKCPSCGAWNTLIEQAAG--AAGGGPANNRFGTQFASL 57
           MAK  ++ FVC ECG  + KW GKC +CGAWN++ E+AA      G  A      +F  L
Sbjct: 1   MAKSPSSQFVCQECGAVTRKWAGKCEACGAWNSITEEAAREEVPKGLTAGKGKRIEFVGL 60

Query: 58  AGASELATLSEIEATDVARTPTGLDELDRVLGGGIVSGGVTLIGGDPGIGKSTLLLQAVD 117
            G+          A  +AR  TG+ ELDRV GGG+V G   L+GGDPGIGKSTLLLQA  
Sbjct: 61  EGS----------AAPLARWLTGIGELDRVCGGGLVPGSCLLVGGDPGIGKSTLLLQATA 110

Query: 118 ALQRAGQNALYVTGEESGSQVALRSKRLGLDHSQVQVLAEIQLEKIIATLDAT-RPAIAV 176
            L  +  +  Y++GEE+  QV +R+ RLG   + V + +   L  IIA+LD    P + V
Sbjct: 111 RLS-SQISVAYISGEEAVDQVRMRAARLGYAKATVALASAGSLRDIIASLDQPDAPQVVV 169

Query: 177 IDSIQTVYSDQLTSAPGSVAQVRECAAHLTRFAKTSGTAVVLVGHVTKEGALAGPRVLEH 236
           IDSIQTVY+D + SAPG+V+QVR CAA L R AK  G  + LVGHVTKEG +AGPRVLEH
Sbjct: 170 IDSIQTVYADNIESAPGTVSQVRACAAELIRLAKRRGFVLFLVGHVTKEGTIAGPRVLEH 229

Query: 237 MVDTVLYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVTNPSAIFLSQHAEPV 296
           MVDTVLYFEGD    FR++RA+KNRFGA +EIGVF MTE GL  V NPSA+FL++    V
Sbjct: 230 MVDTVLYFEGDRGHQFRILRAVKNRFGATDEIGVFEMTEGGLSEVANPSALFLAERRGNV 289

Query: 297 PGSVVLVTLEGTRPMLVEIQALV-DNGGPSPRRLSVGLDRDRLAMLLAVLHRHAGVACMD 355
            GS V   +EGTRPMLVEIQALV  +   SPRR  VG D +RL+M+LAVL    G+A   
Sbjct: 290 SGSCVFAGMEGTRPMLVEIQALVAPSSLSSPRRAVVGWDTNRLSMVLAVLDARCGLALSG 349

Query: 356 QDVFVNAVGGVRISEPAADLAVMLAITSSLRGKPMPKGFIAFGEVGLAGEVRPAPRGQER 415
            DV++N  GG+RI+EPAADLAV  A+ SS    P+P   + FGE+GL+GEVR   +   R
Sbjct: 350 NDVYLNVAGGLRIAEPAADLAVAAALVSSASDVPVPADMVVFGEIGLSGEVRAVAQADTR 409

Query: 416 LREAAKLGFSVAVVPKANAPRKGTKEI---EGLTIHAVDRIEEAMDVVR 461
           L+EAAKLGF+ A+VP      KG         L I ++  +++ + + R
Sbjct: 410 LKEAAKLGFAQALVPARPRKDKGGGAAGAGSPLAIRSIGHLQDVLGLFR 458