Pairwise Alignments

Query, 464 a.a., DNA repair protein RadA from Variovorax sp. SCN45

Subject, 460 a.a., DNA repair protein RadA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  476 bits (1226), Expect = e-139
 Identities = 248/456 (54%), Positives = 327/456 (71%), Gaps = 6/456 (1%)

Query: 5   KTTFVCSECGGTSPKWLGKCPSCGAWNTLIEQAAGAAGGGPANNRFGTQFASLAGASELA 64
           K  FVC+ECG   P+W G+C +C AWNT+ E    A+     N R  + +A  AG S++ 
Sbjct: 6   KRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERL-SGYAGSAGVSKVQ 64

Query: 65  TLSEIEATDVARTPTGLDELDRVLGGGIVSGGVTLIGGDPGIGKSTLLLQAVDALQRAGQ 124
            LS+I   ++ R  TG  E DRVLGGG+V G   LIGG+PG GKSTLLLQ +  L     
Sbjct: 65  KLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLAEQ-M 123

Query: 125 NALYVTGEESGSQVALRSKRLGLDHSQVQVLAEIQLEKIIATLDATRPAIAVIDSIQTVY 184
             LYVTGEES  QVA+R+ RLGL  + + +L+E  +E+I    +  +P + VIDSIQ ++
Sbjct: 124 KTLYVTGEESLQQVAMRAHRLGLPTANLNMLSETSIEQICLIAEEEQPKLMVIDSIQVMH 183

Query: 185 SDQLTSAPGSVAQVRECAAHLTRFAKTSGTAVVLVGHVTKEGALAGPRVLEHMVDTVLYF 244
              + S+PGSVAQVRE AA+LTRFAKT G A+V+VGHVTK+G+LAGP+VLEH +D  +  
Sbjct: 184 MADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCSVLL 243

Query: 245 EGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVTNPSAIFLSQHAEPVPGSVVLVT 304
           +GD  S FR +R+ KNRFGAVNE+GVFAMTE+GL+ V+NPSAIFLS+  E   GS V+V 
Sbjct: 244 DGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSVMVV 303

Query: 305 LEGTRPMLVEIQALVDNG-GPSPRRLSVGLDRDRLAMLLAVLHRHAGVACMDQDVFVNAV 363
            EGTRP+LVEIQALVD+    +PRR++VGL+++RLA+LLAVLHRH G+   DQDVFVN V
Sbjct: 304 WEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFVNVV 363

Query: 364 GGVRISEPAADLAVMLAITSSLRGKPMPKGFIAFGEVGLAGEVRPAPRGQERLREAAKLG 423
           GGV+++E +ADLA++LA+ SSLR +P+P+  + FGEVGLAGE+RP P GQER+ EAAK G
Sbjct: 364 GGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAAKHG 423

Query: 424 FSVAVVPKANAPRKGTKEIEGLTIHAVDRIEEAMDV 459
           F  A+VP AN P+K     EG+ +  V ++ +A+ V
Sbjct: 424 FRRAIVPAANVPKKPP---EGMLVFGVKKLADALSV 456