Pairwise Alignments

Query, 464 a.a., DNA repair protein RadA from Variovorax sp. SCN45

Subject, 460 a.a., DNA repair protein from Escherichia coli BL21

 Score =  477 bits (1227), Expect = e-139
 Identities = 251/461 (54%), Positives = 330/461 (71%), Gaps = 7/461 (1%)

Query: 1   MAK-DKTTFVCSECGGTSPKWLGKCPSCGAWNTLIEQAAGAAGGGPANNRFGTQFASLAG 59
           MAK  K  FVC+ECG   P+W G+C +C AWNT+ E    A+     N R  + +A  AG
Sbjct: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERL-SGYAGSAG 59

Query: 60  ASELATLSEIEATDVARTPTGLDELDRVLGGGIVSGGVTLIGGDPGIGKSTLLLQAVDAL 119
            +++  LS+I   ++ R  TG  E DRVLGGG+V G   LIGG+PG GKSTLLLQ +  L
Sbjct: 60  VAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKL 119

Query: 120 QRAGQNALYVTGEESGSQVALRSKRLGLDHSQVQVLAEIQLEKIIATLDATRPAIAVIDS 179
            +     LYVTGEES  QVA+R+ RLGL    + +L+E  +E+I    +  +P + VIDS
Sbjct: 120 AQQ-MKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDS 178

Query: 180 IQTVYSDQLTSAPGSVAQVRECAAHLTRFAKTSGTAVVLVGHVTKEGALAGPRVLEHMVD 239
           IQ ++   + S+PGSVAQVRE AA+LTRFAKT G A+V+VGHVTK+G+LAGP+VLEH +D
Sbjct: 179 IQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCID 238

Query: 240 TVLYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVTNPSAIFLSQHAEPVPGS 299
             +  +GD  S FR +R+ KNRFGAVNE+GVFAMTE+GL+ V+NPSAIFLS+  E   GS
Sbjct: 239 CSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGS 298

Query: 300 VVLVTLEGTRPMLVEIQALVDNG-GPSPRRLSVGLDRDRLAMLLAVLHRHAGVACMDQDV 358
            V+V  EGTRP+LVEIQALVD+    +PRR++VGL+++RLA+LLAVLHRH G+   DQDV
Sbjct: 299 SVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDV 358

Query: 359 FVNAVGGVRISEPAADLAVMLAITSSLRGKPMPKGFIAFGEVGLAGEVRPAPRGQERLRE 418
           FVN VGGV+++E +ADLA++LA+ SSLR +P+P+  + FGEVGLAGE+RP P GQER+ E
Sbjct: 359 FVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISE 418

Query: 419 AAKLGFSVAVVPKANAPRKGTKEIEGLTIHAVDRIEEAMDV 459
           AAK GF  A+VP AN P+K     EG+ I  V ++ +A+ V
Sbjct: 419 AAKHGFRRAIVPAANVPKKAP---EGMQIFGVKKLSDALSV 456