Pairwise Alignments

Query, 504 a.a., Glycine betaine transporter OpuD from Variovorax sp. SCN45

Subject, 657 a.a., choline/carnitine/betaine transporter BetTC from Pseudomonas putida KT2440

 Score =  412 bits (1059), Expect = e-119
 Identities = 212/472 (44%), Positives = 294/472 (62%), Gaps = 4/472 (0%)

Query: 6   SAGLIAAVVLWGLLSPASLDSVFSTALSGITRNFGWFYLWVVLGLVVLAFFLAFSRFGDL 65
           SA L+  +VL+         ++F      I  N  WFY+ VV  +++   FLA SR+GD+
Sbjct: 19  SAILVFLLVLYATAFQEHAQTLFEQVQRWIITNASWFYILVVALVLISVVFLAVSRYGDI 78

Query: 66  KLGEEDDEPEFSLGAWFAMLFAAGMGIGLVFWGVAEPISHYANPPPGVVAGTPDAAGVAM 125
           KLG +  EP++   +WFAMLF+AGMGIGL+F+GVAEP+ H++ PP G   GT  AA  AM
Sbjct: 79  KLGPDHSEPDYRKSSWFAMLFSAGMGIGLMFFGVAEPVMHFSTPPVGD-PGTVAAAREAM 137

Query: 126 RYAFFHWGLHPWAIYGIVGLSIAFFTFRRKT-LALVSSATEALPWRFVRRLSPAFNVLAV 184
           +  FFHWGLH WAIY IV L +A+F+FR    L L S+    +  R    +  A +V A+
Sbjct: 138 KITFFHWGLHAWAIYAIVALILAYFSFRNGLPLTLRSALYPLIGERIYGPIGHAVDVFAI 197

Query: 185 VATAFGVAASLGMGATQINSGLHAAFGTAIGRGTQAAIIVVTTVLFVTSAVSGVERGVKW 244
           + T FGVA SLG G  QINSG H  FG  +    Q  +I  T  L   S  SG+++G++ 
Sbjct: 198 LGTVFGVATSLGYGVLQINSGFHHVFGLPVNTTVQVILITATCALATLSVASGLDKGIRI 257

Query: 245 LSMGNLVLAALLALVVLVLGPTVAIVETFTNTLGAYIAEFVRMSLRMNPFRNSSWVGDWT 304
           LS  NL LA +L L VL+LGPTV +++T+    GAY+++ V  +  +  +  + W+G WT
Sbjct: 258 LSELNLSLAVILMLFVLLLGPTVFLLQTYVQNTGAYLSDIVNKTFNLYAYEPTDWIGGWT 317

Query: 305 LFYWAWWLAWSPFVGLFIARVSRGRTIRQFILGTVIAPTLVGFAWFSVFGGAALNFQIFQ 364
           L YW WWL+WSPFVGLFIAR+SRGRTIR+F+ G +  P      W +VFG +A++  +  
Sbjct: 318 LLYWGWWLSWSPFVGLFIARISRGRTIREFVCGVLFVPAGFTLLWMTVFGDSAIHMILND 377

Query: 365 GV-PLVEAVKADVSTTMFVMFKAMPMGALLSMVATLLVFVFFVTSGDSATLVLGTMSTGG 423
           GV  L   V  D S  +F   +  P  +++S+VA L+V VFFVTS DS  LV+  +++ G
Sbjct: 378 GVKDLAAVVSEDSSLALFAFLEHFPFSSIISLVAVLMVVVFFVTSADSGALVVDMLASSG 437

Query: 424 NPNPPARVKITWGVLVAAIALSLLFAGGLKAIQTATIVFALPFAFVILLMAL 475
             + P   +I W V + A+A++LL A GLKA+QTATI  ALPFA VILL+A+
Sbjct: 438 QGHSPLWQRIFWSVCIGAVAIALLLANGLKALQTATIASALPFA-VILLVAI 488