Pairwise Alignments

Query, 315 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 309 a.a., Pca operon transcriptional activator PcaQ from Variovorax sp. SCN45

 Score = 97.8 bits (242), Expect = 3e-25
 Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 40/297 (13%)

Query: 1   MKLQQLRVLLAVAQHGSIHEASRSLHTTQPALSKTISELERELGVTLMSRSTRGVSLTPY 60
           +KL+ L+ L+ VAQ  ++  A+++L  TQPA+SKT++ELE  +G  L+ R  RGV LTP 
Sbjct: 9   LKLRHLQCLVMVAQERNLVRAAKALSLTQPAVSKTVAELEEIIGRPLLLRRRRGVELTPA 68

Query: 61  GTALVKRASLVEQELRHALEDIEAIRGHDEG-----------QLHIGFTAVAS--SGPLP 107
              LV+ A             + A+RG  EG           QLH+   A+ +  +  LP
Sbjct: 69  AEVLVRHA-------------VSALRGLSEGLGLAMDMPEADQLHVAVGALPNMVANLLP 115

Query: 108 DAMASFRQRFPNVAMRGFELRPQQIFEGLREGRLDLGLISTCNGPGTGALQWEPLFSVAM 167
           +A+A      P + +R       Q+   LR+G +DL L           L +E L+S  +
Sbjct: 116 EAVALLHASHPALRVRVVSGINAQLMTQLRQGEIDLVLGRLAQASAMADLAFEHLYSEPL 175

Query: 168 HLSVRAGHPLRRVRRLQPLLD--ADWLVLDPIDDAGSPLVSTMN----MHGLQMPRRMVH 221
            L VR GHPL    R +P LD  A + ++ P+  +GS +  T +      G+ +P R+V 
Sbjct: 176 LLVVRPGHPL--ASRRKPALDALAGYPLVLPV--SGSLIRHTADAFLIAQGVALPNRLVE 231

Query: 222 SASNLLGLQLATQTDLISMWSDFVFHGAGPLRLQPGLLEKLPISDELPDFDVFLVYR 278
           +      + L  +++  ++W  F   GA    L  G L+++ I     +  V L  R
Sbjct: 232 ATDTSFAIGLLQRSE--AVW--FAPQGAVEGFLARGELKRVAIDTASTEGPVGLTVR 284