Pairwise Alignments

Query, 355 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 355 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  112 bits (280), Expect = 1e-29
 Identities = 97/370 (26%), Positives = 155/370 (41%), Gaps = 72/370 (19%)

Query: 17  LALLLVVLFLALAFAPFIFP------GVKALSVAAKILVFVVLVASFDLLLGYTGIVSFA 70
           L  L++++ LAL     + P          L++  KIL + ++  + DL+ GY G++S  
Sbjct: 21  LGALILIVLLALPLLSLLPPDNAFHISAYTLTLVGKILCYAIVALALDLVWGYAGMLSLG 80

Query: 71  HTMFFGIGAYGIAISASRLGPN--------------------------WGAVLVGLGASL 104
           H +FF +G Y + +   R                              W   LV L   L
Sbjct: 81  HGLFFALGGYAMGMYLMRQASGDELPAFMTFLSWTELPWYWVGTQHFVWAMCLVVLAPGL 140

Query: 105 AISLVLSFAIGLFSLRVRAIFFAMITLAVASAFQTLASQLSDFTGGEDGLTFKLPELISP 164
              L L F    F  R++ ++F+++T A+  A   L  +     GG +G T         
Sbjct: 141 ---LALVFGFFAFRSRIKGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFT--------- 188

Query: 165 SFEFSEEPFLGVSLDGRLLCYYLLFVAAVVLVLALL----RIVNSPFGRVLQAIRENEFR 220
              F      G++  G      +LFVA V L++A L    R+  S FGRVL A+R+ E R
Sbjct: 189 --NFRSILGFGITEPGTRA---VLFVATVALLVASLFIGWRLARSKFGRVLTALRDAENR 243

Query: 221 AEAIGYRVVVYRTTAAVLSALFATLAGAMLAIWLRYNGPDTSLSFEIMIDVLLIVVIGGM 280
               GY    ++    VLSA+   LAGA+    +    P + +S    I+  + V +GG 
Sbjct: 244 LMFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINP-SEMSPTNSIEAAVWVALGGR 302

Query: 281 GTIYGAAIGAVLFVIAQSYLQDLLRIGNEAASGLPWLAALLSPDRWLLWLGVLFVLSVYY 340
           GT+ G  +GA                     +G+     +  P+ WL +LG LF++   Y
Sbjct: 303 GTLIGPLLGA------------------GVVNGMKSWFTVAFPEYWLFFLGALFIIVTLY 344

Query: 341 FPTGIVGKLR 350
            P G++G L+
Sbjct: 345 LPKGVIGLLK 354