Pairwise Alignments

Query, 355 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

 Score =  117 bits (293), Expect = 5e-31
 Identities = 95/353 (26%), Positives = 165/353 (46%), Gaps = 39/353 (11%)

Query: 7   LSNDMPRSRLLALLLVVLFLALAFAPFIFPGVKALSVAAKILVFVVLVASFDLLLGYTGI 66
           +SN +   +    +++ L +     PF F    A+ +A  IL++V+L    ++++G  G+
Sbjct: 81  VSNYLTLPKTQRYVIIGLIVVALVWPF-FGSRGAVDIATLILIYVLLGLGLNIVVGLAGL 139

Query: 67  VSFAHTMFFGIGAYGIAISASRLGPNWGAVLVGLGASLAISLVLSFAIGLFSLRVRAIFF 126
           +   +  F+ +GAY  A+ +  LG ++   L   G   A      F +G   LR+R  + 
Sbjct: 140 LDLGYVGFYAVGAYSYAMLSHYLGWSFWVCLPIAGLMAA---TFGFLLGFPVLRLRGDYL 196

Query: 127 AMITLAVASAFQTLASQLSDFTGGEDGLT-FKLPELISPSFE---------FSEEPFLGV 176
           A++TL      +     L+D+TGG +G++    PE    +FE         F E  F G+
Sbjct: 197 AIVTLGFGEIIRLFLRNLTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHE--FFGL 254

Query: 177 SLDGRLLCYYLLFVAAVVLVLALL---RIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRT 233
             +      +L  VA ++ +LAL    R++  P GR  +A+RE+E    A+G    V + 
Sbjct: 255 QYNSINKVIFLYLVALLLALLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKL 314

Query: 234 TAAVLSALFATLAGAMLAIWLRYNGPDTSLSFEIMIDVLLIVVIGGMGTIYGAAIGAVLF 293
           +A  L A FA  AG+  A       P++    E  I +L IVV+GGMG+  G  + A++ 
Sbjct: 315 SAFTLGACFAGFAGSFFAARQGLVTPESFTFIESAI-ILAIVVLGGMGSQLGVILAAIVM 373

Query: 294 VIAQSYLQDLLRIGNEAASGLPWLAALLSPDRWLLWLGVLFVLSVYYFPTGIV 346
           ++    L +L+R  +E                 +L  G L VL + + P G++
Sbjct: 374 IL----LPELMREFSEYR---------------MLMFGALMVLMMIWRPQGLL 407