Pairwise Alignments

Query, 355 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 430 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  119 bits (299), Expect = 1e-31
 Identities = 98/350 (28%), Positives = 162/350 (46%), Gaps = 74/350 (21%)

Query: 16  LLALLLVVLFLALAFAPFIFPGVKALSVAAKILVFVVLVASFDLLLGYTGIVSFAHTMFF 75
           L ALLL+V       AP IF    A++V +++ + ++   S+++LLG  G++SF H ++ 
Sbjct: 21  LFALLLIV-------APRIFTSGLAMTVLSQMGIAIIACLSYNILLGQGGMLSFGHAVYT 73

Query: 76  GIGAYGIAISASRLGPNWGAVLVGLGASLAISLV--------LSFAI--GLFSLRVRAIF 125
           G+G++ +AI A        +V  G    L +SLV        + FA+  G  + R     
Sbjct: 74  GLGSF-LAIHALN------SVTAG-SLPLPVSLVPIVGGLAGVGFAVLFGYVTTRKSGTT 125

Query: 126 FAMITLAVASAFQTLASQLSDFTGGEDGLTFKLPELISPSFEFSEEPFLGVSLDGRLLCY 185
           FAMITL +      L+  + +F GGE G++             + +PF+G++   ++  Y
Sbjct: 126 FAMITLGLGELVFALSLMIPEFFGGEGGVS---------GDRMAGKPFMGITYGPQVQVY 176

Query: 186 YLLFVAAVVLVLALLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTTAAVLSALFATL 245
           YL+ V   + V  +     +P GR+L A+R+N  R E +GY     R  A +++  FA +
Sbjct: 177 YLIAVYTFISVGLMFAFTRTPLGRMLNAVRDNPERVEFVGYDTQRVRYIAFIIAGFFAGI 236

Query: 246 AGAMLAIWLRYNGPDTSLSFEIMI----------DVLLIVVIGGMGTIYGAAIGAVLFVI 295
           +G + A           L+FEI+             LL   +GG    +G  IG +L V+
Sbjct: 237 SGGLGA-----------LNFEIVTAEVVGAARSGAYLLFTFLGGATFFFGPIIGGILMVL 285

Query: 296 AQSYLQDLLRIGNEAASGLPWLAALLSPDRWLLWLGVLFVLSVYYFPTGI 345
           A   L +  +                    WLL+LG++F+  V Y P GI
Sbjct: 286 AFVLLSEFTK-------------------AWLLYLGLIFLFMVIYAPGGI 316