Pairwise Alignments

Query, 355 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 424 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Dickeya dianthicola ME23

 Score =  127 bits (320), Expect = 4e-34
 Identities = 97/354 (27%), Positives = 177/354 (50%), Gaps = 41/354 (11%)

Query: 12  PRSRLLALLLVVLFLALAFAPFIFPGVKALSVAAKILVFVVLVASFDLLLGYTGIVSFAH 71
           PR +LLAL L++  +A  F   +  G   + +A   +++++L    ++++G +G++   +
Sbjct: 87  PRQKLLALALIIAAVAWPFV--VSRGT--VDIATLTMIYIILGLGLNVVVGLSGLLVLGY 142

Query: 72  TMFFGIGAYGIAISASRLGPNWGAVLVGLGASLAISLVLSFAIGLFSLRVRAIFFAMITL 131
             F+ IGAY  A+ +   G  +   L   G + A+S    F +G   LR+R  + A++TL
Sbjct: 143 GGFYAIGAYTYALLSHYYGLGFWQCLPLAGLTAALS---GFLLGFPVLRLRGDYLAIVTL 199

Query: 132 AVASAFQTLASQLSDFTGGEDGLTFKLPELISPSFEFSEEP----------FLGVSLD-- 179
                 + L    + FTGG +G++ ++P+      EF+  P          F G++ D  
Sbjct: 200 GFGEIVRILLLNNTGFTGGPNGIS-QIPKPTFFGLEFNRAPREGGWDTFHHFFGLNYDPS 258

Query: 180 GRLLCYYLLFVAAVVLVLALL-RIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTTAAVL 238
            R++  Y++ +  V+L L ++ R++  P GR  +A+RE+E    ++G      + TA  +
Sbjct: 259 DRIIFLYMVALLLVLLTLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTKIKLTAFTI 318

Query: 239 SALFATLAGAMLAIWLRYNGPDTSLSFEIMIDVLLIVVIGGMGTIYGAAIGAVLFVIAQS 298
           SA FA  AG + A    +  P+ S +F     VL IVV+GGMG+ +   + A+L V+++ 
Sbjct: 319 SAAFAGFAGTLFAARQGFVSPE-SFTFVESAFVLAIVVLGGMGSQFAVILAAILLVVSRE 377

Query: 299 YLQDLLRIGNEAASGLPWLAALLSPDRWLLWLGVLFVLSVYYFPTGIVGKLRAR 352
            ++DL    NE +               +L LG L VL + + P G++   R +
Sbjct: 378 LMRDL----NEYS---------------MLLLGALMVLMMIWRPQGLLPMKRTQ 412