Pairwise Alignments

Query, 455 a.a., AmpG permease from Variovorax sp. SCN45

Subject, 515 a.a., Muropeptide permease AmpG from Pseudomonas putida KT2440

 Score =  241 bits (616), Expect = 3e-68
 Identities = 114/192 (59%), Positives = 153/192 (79%)

Query: 250 LIEPFADFIHRYKWQAVLILSLIAIYRISDVVMGIMANPFYVDMGFTKDEVATVSKIYGV 309
           ++ P  DFI RY+WQA+L+L LIA YR+SD VMG+MAN FY+DMGFTKD++A+VSKI+G+
Sbjct: 302 VLTPINDFITRYRWQALLLLGLIATYRMSDTVMGVMANVFYIDMGFTKDQIASVSKIFGL 361

Query: 310 VMTLVGAFVGGVLSMRLGVMRVLMMGAVLSAASNLLYAWLATRGHDTTALIAVVSADNLA 369
           VMTLVGA VGG+L +R G+M +L +G V SA +N+L+  LA  G +   L+  +S DN +
Sbjct: 362 VMTLVGAGVGGLLIVRFGIMPILFIGGVASAGTNILFLMLADMGPNLEMLVVTISLDNFS 421

Query: 370 GGIASAAFIAYLSSLTNISYSATQYALFSSLMLLLPKFIAGYSGAFVDAYGYSNFFVATA 429
            G+A++AF+AYLSSLTN+ +SATQYAL SS+MLLLP+ I GYSG  V+ +GY +FF+ TA
Sbjct: 422 SGMATSAFVAYLSSLTNLKFSATQYALLSSIMLLLPRLIGGYSGVIVEKFGYHDFFLITA 481

Query: 430 LLGVPVLVLVAL 441
           LLGVP L+L+AL
Sbjct: 482 LLGVPTLILIAL 493



 Score =  210 bits (535), Expect = 8e-59
 Identities = 122/263 (46%), Positives = 166/263 (63%), Gaps = 19/263 (7%)

Query: 12  PSPPWRDALKVYLEPATLRMLALGFSAGLPLLLVLGTLSFRLREAGIDRTTIGYLSWVGL 71
           P   WR AL  Y  P+TL +L LGF+AGLP +LV  TLS  LREAG+ R TIGY S +GL
Sbjct: 2   PRKTWRAALAAYASPSTLVLLLLGFAAGLPYMLVFSTLSVWLREAGVARETIGYASLIGL 61

Query: 72  AYGFKWVWAPLVDRLPLPPLTTLLGRRRGWLLLAQGLVITGLVGMAMNDPRLGLTPLIWC 131
           AY FKWVW+PL+D+  LP L  L GRRR WLLL+Q LV+ GLVGM++ DP+  L+ LI  
Sbjct: 62  AYAFKWVWSPLLDQWRLPLLGGL-GRRRSWLLLSQALVVIGLVGMSLCDPQQHLSWLIAM 120

Query: 132 ALLVAFGSATQDIALDAFRIESAEPRKQAAMAAAYQTGYRLAMIWAGAGVLWVATWAEVA 191
           A+LVAF SATQDIA+DA+R+E A+ ++QAA+AA+Y  GYR+A + A AG L+ A W    
Sbjct: 121 AVLVAFASATQDIAVDAYRLEIADDQRQAALAASYMAGYRVAALLATAGALFFAEW---- 176

Query: 192 PAVAATGAAAYQNGAWKTAYLVMAASMTVGVLTVLLSPEPLPRALPKARNAAEWLRSALI 251
               +TG  +Y + AW   Y++    M   + T L+  EP   ++P        +R+ L 
Sbjct: 177 --FGSTG-FSYLHKAWAGTYVMFGVMMLPALFTTLVMREP---SVP--------MRTQLS 222

Query: 252 EPFADFIHRYKWQAVLILSLIAI 274
                 +H+     VLI+ L+++
Sbjct: 223 AARYGLVHQMASVFVLIILLVSV 245