Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  128 bits (322), Expect = 1e-34
 Identities = 83/298 (27%), Positives = 139/298 (46%), Gaps = 3/298 (1%)

Query: 1   MNLSTRQMRAFLHVARIGNFTRAAEQAHITQAGLSILIREMEKQLGCRLFDRTTRVVSLT 60
           M    + +R+F+ +A +G+F  AAE  H++Q  LS  I+++E+ LG  L +RTTR VSLT
Sbjct: 1   MEYELQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLT 60

Query: 61  PEGRRLLPVVERLMTDLDDVAAELGAAGDAARHTLRIAATPLVSSHLLPQVFSTFRAAHP 120
             GR  LP   RL+ D +D    +    +     + +A  P  + + LP V   +   +P
Sbjct: 61  SVGRDFLPKARRLLDDFEDSILSIRELAERQTGQVTLACIPTAAFYFLPSVIRDYNEQYP 120

Query: 121 QVSLRLFDADLRDVEAMVTAGDADVGLGFFFKAAPGLERTPVGRFHLMRVSRLDDDADAA 180
           ++ +RL D    D    V  G+AD G+       P +E   + + H +   R D      
Sbjct: 121 KIRIRLLDLSANDGLEAVLRGEADFGINMMSGQHPDIEFVSLVQEHFVLACRRDHPLANR 180

Query: 181 PGVGTAPWSALRGAELVGLPPGNPIQKVIDQHLATIGRADAQRPAFNFFGTLISMVEAGF 240
             V    W+ L    L+G+   +  + ++D  L+ +              T + MVEAG 
Sbjct: 181 ASV---TWTELADYRLIGVGRLSGNRMLLDHALSGLNLRPKWFYEVQHLSTSLGMVEAGL 237

Query: 241 GTAVMPTFALAACRRHRVRTDVLTKPKVGLDFYRVTKRGAHETEAMQAFVATLVKALP 298
           G + MP+ A+       + +  L +P+V      V +RGA  + A + FV+ L++  P
Sbjct: 238 GVSAMPSLAMPNADHPTLVSVPLIEPQVTRTLGLVYRRGASLSPAAEKFVSILLQKWP 295