Pairwise Alignments

Query, 267 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Variovorax sp. SCN45

Subject, 265 a.a., putative Exodeoxyribonuclease III from Pseudomonas putida KT2440

 Score = 85.9 bits (211), Expect = 8e-22
 Identities = 75/267 (28%), Positives = 117/267 (43%), Gaps = 21/267 (7%)

Query: 3   KLTSLNLNGLRSAATKGVADWVAELAPDCICMQEIRVQASDVEGRFEEMAGLKGHFHFAE 62
           K+ + N+NG+RS     +A W+    PD  C+QE++           E AG  G  H  +
Sbjct: 5   KIATFNINGIRSRLPALLA-WLEREQPDIACLQELKAADQQFPRAELEAAGY-GSLHHGQ 62

Query: 63  KKGYAGTAVYTKHA-PSQVVVGWGDAEFDAEGRYLELRFDTPKRKFSVISCYFPSGSS-G 120
              + G A+  + + P +V  G    E D++ RYLE           V   Y P+G+   
Sbjct: 63  PS-WNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLE----AAAHGVLVACLYLPNGNPLP 117

Query: 121 EERQEAKFRFLKGFFPHLVALKKE-REFVLCGDINIAHQQIDLKNWRGNQKNSGFLPEER 179
             + + K  + +    H  +L++     +L GD N+    +D+ N R   K++   PE R
Sbjct: 118 GPKFDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPESR 177

Query: 180 AWMTRLLDAGTEGAGLVDVYRKLKPDTTDEAYTWWSNRGQAYANNVGWRLDYHL----AT 235
           A   RLLD      G +D  R L PD  +  YT+W      +A N G R+D+ L      
Sbjct: 178 ACYQRLLD-----QGWLDAIRHLYPD--ERVYTFWDYFRNHWARNAGLRIDHLLLNRELA 230

Query: 236 PAIGALARTEQIYKTVKFSDHAPITVE 262
           P +        +    K SDHAP+ +E
Sbjct: 231 PYLKRAGVDAWVRNQAKASDHAPVWIE 257