Pairwise Alignments

Query, 286 a.a., Transcriptional regulator, IclR family from Variovorax sp. SCN45

Subject, 277 a.a., Hmg transcriptional repressor from Pseudomonas putida KT2440

 Score =  139 bits (350), Expect = 7e-38
 Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 19/280 (6%)

Query: 2   ATDTDRAQRGIQSIEVGGQLLRALVHHGRPMALKDLAREADMTAAKAHPYMVSFGRLGLI 61
           ++ TD  ++ ++S EVG  +L+AL       +L  LA    M A+K H Y+ +    G  
Sbjct: 5   SSPTDTGKQKVRSAEVGTDILKALAELSPSTSLSRLAEHVQMPASKVHRYLQALIASGFA 64

Query: 62  EQDRASGHYLLGPLALQLGLISLQQADPVHIATPLIGQLAQQIGHTVALAVWGARGATIV 121
           EQD A+ HY LG  AL++GL +L   D + +A   + QL  ++  +  +AVWG +GAT+V
Sbjct: 65  EQDAATNHYGLGREALRVGLAALGSIDVLKVAAMPLSQLRDELNESCFIAVWGNQGATVV 124

Query: 122 RTAESPSPVHVNMRHGTVFSLTNTASGRVFATYLDAEVVRSLLEEERQRQKQRKGGEPPP 181
               +   V V  + G+V  L ++++G VFA YL     + L + E    +Q        
Sbjct: 125 SIEPAVRAVTVVTQIGSVLPLLSSSTGLVFAAYLPERETQELRDRELAALQQ-------- 176

Query: 182 PAGMPPVQPLPSWSDFERQLKEVRDHGISRSDGEVIEGVSAMAAPVFDHTGAIVLAVTAI 241
                      + SD+   L  +R+ G+    G ++ GV A++APVF+  G I   +T +
Sbjct: 177 -----------TASDYHTLLAGIREKGLHHVHGLLMPGVDALSAPVFNAMGQIAAVMTVV 225

Query: 242 GPAGIFNTAWDGEISRALRACADTVSQRLGATAVPAPANS 281
           GP  IF+    G  +++L   A TVS R+G    P  A++
Sbjct: 226 GPTSIFHADEHGPAAQSLLTAARTVSWRMGYAGNPHCAST 265