Pairwise Alignments

Query, 410 a.a., Tetracycline resistance, MFS efflux pump => Tet(C) from Variovorax sp. SCN45

Subject, 406 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 93/345 (26%), Positives = 142/345 (41%), Gaps = 38/345 (11%)

Query: 10  PSDAKGRHAHAVILAIVTLDA---IGISLVMPIVPSLLREVGHTGDLGWRFGAFLSLYAL 66
           P   KGR   +  L +  L A   +     +P +P++ +E+G           F+  +  
Sbjct: 4   PGARKGRFDISFALLLPLLLAAQPVATDSYLPALPAIAKELGSAST---SLTLFVLAFGF 60

Query: 67  MQFLCAPVLGALSDRFGRRPVLLISVAGSAIDALFMAFAPSLWMLFLGRAIAGMTGASTA 126
            Q LC P    L+DRFGRRPVLL  +    + AL  AFA S+ +L   RA+ G + A+  
Sbjct: 61  AQLLCGP----LADRFGRRPVLLAGLGCYVLAALGGAFADSVALLAGWRALQGFSMAAIL 116

Query: 127 VAS-AAIADLTPENQRARWFGRMGACFGLGFIAGPAIGG-VLGDYGVRLPFVAAAVLNGL 184
           V S AA+ DL P ++      R     G+  +  P +G  ++   G R   VA AV   +
Sbjct: 117 VCSRAAVRDLYPAHEGPHVMARGLTGLGVVGLLAPLLGAWLVQGAGWRWVMVAMAVYASV 176

Query: 185 TFLVGLLVLRESRPP-----ALASQPFDRGVLHPLAPLRWATSFPALLPLLGVFLLLVLV 239
            F +      E+R P       A +   R V    +   WA+   +    L  FLLL  +
Sbjct: 177 LFAMCWYSFAETRKPMGEDGLSAPRGSTRTVFASRSFRAWASVAASTYGGLFCFLLLSPM 236

Query: 240 GEVAGTTWVIYGQDRYAWNGTMVGLSLAVFGLLHALVQGFVAGPLVERWGERAAIAVGII 299
             +    W        AW G      +   G L  +    +   L+ R+G    + +G  
Sbjct: 237 VYIGYLGW------SPAWYGW-----IPAGGSLVYIFSTTMCRTLLRRYGPVRTVRLGAS 285

Query: 300 ADGTGYALIAFATQGW-MAIAMLPLL------CMG-GVCAPALQA 336
              TG  + A     W M ++ +PLL      C+G G+  P  QA
Sbjct: 286 LSITGAVIQALGC--WLMPLSAVPLLFGHAVYCLGHGIHQPCGQA 328