Pairwise Alignments

Query, 410 a.a., Tetracycline resistance, MFS efflux pump => Tet(C) from Variovorax sp. SCN45

Subject, 394 a.a., tetracycline resistance protein from Agrobacterium fabrum C58

 Score =  378 bits (971), Expect = e-109
 Identities = 191/378 (50%), Positives = 262/378 (69%), Gaps = 2/378 (0%)

Query: 21  VILAIVTLDAIGISLVMPIVPSLLREVGHTGDLGWRFGAFLSLYALMQFLCAPVLGALSD 80
           VIL+ V LDAIG  L+ PI+P +L EV   GD+G+ +G  L ++A+MQF+ +P+LGALSD
Sbjct: 7   VILSTVALDAIGAGLIFPILPDILVEVTGGGDIGFLYGVMLGVFAVMQFVFSPILGALSD 66

Query: 81  RFGRRPVLLISVAGSAIDALFMAFAPSLWMLFLGRAIAGMTGASTAVASAAIADLTPENQ 140
           RFGRRPVLL+S+AG+ +D L MAF+P  W+L +GRA+AG+T A+ AVASA I D+TP  Q
Sbjct: 67  RFGRRPVLLLSLAGTLLDYLVMAFSPLGWVLVVGRAMAGITSANMAVASAYITDITPAEQ 126

Query: 141 RARWFGRMGACFGLGFIAGPAIGGVLGDYGVRLPFVAAAVLNGLTFLVGLLVLRESRPPA 200
           RA+ FG +GA   LGFI GP IGGV+G + +R PF+ AA+ NGL   V L VL ESR   
Sbjct: 127 RAQRFGTVGAVMSLGFIIGPVIGGVIGAWWLRAPFLVAALFNGLNLFVALFVLPESRKAG 186

Query: 201 LASQPFDRGVLHPLAPLRWATSFPALLPLLGVFLLLVLVGEVAGTTWVIYGQDRYAWNGT 260
                F    L+PLAPL W  +F  LLPL+ V ++  LV  + GT WV+YG +R+ W+  
Sbjct: 187 PGKFAFKE--LNPLAPLVWLWNFKPLLPLVTVSVVFGLVAAIPGTIWVLYGAERFGWDSV 244

Query: 261 MVGLSLAVFGLLHALVQGFVAGPLVERWGERAAIAVGIIADGTGYALIAFATQGWMAIAM 320
            +GLSL+VFG+  AL Q F+ GPL  R+G+   + +G+  D   Y L+AFA Q WM  A+
Sbjct: 245 HMGLSLSVFGVSGALAQAFLVGPLSRRFGDLGTLMIGVGFDMLAYMLMAFANQSWMGYAV 304

Query: 321 LPLLCMGGVCAPALQATLSARVGQAQQGRLQGVLASITSLAAVFGPLLISPLYFAFRTRF 380
            PL  +GGV  PALQ+ +++RV   QQG+LQGVLAS+ SLA + GP+L + ++F+ ++ +
Sbjct: 305 APLFALGGVAMPALQSLVTSRVSDDQQGQLQGVLASLMSLAGIIGPVLTTAVFFSTKSIW 364

Query: 381 PGIVWLAGASLYLLCLPV 398
            G +WL GA+LYLL LP+
Sbjct: 365 IGTIWLVGAALYLLALPL 382