Pairwise Alignments

Query, 350 a.a., ABC transporter spermidine/putrescine-binding protein from Variovorax sp. SCN45

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  448 bits (1152), Expect = e-130
 Identities = 221/344 (64%), Positives = 267/344 (77%), Gaps = 2/344 (0%)

Query: 7   SPTSVLLLAALLAAAGTAGAQTKTIYIGMNGGTMEKAYTQYVFPAFEKAYGAKVVVVPGT 66
           +P   L   +L   A TA A   T+Y+GMNGGTME+ Y   V PAFEKA    VV+VPGT
Sbjct: 2   NPRIALSCLSLALLASTAHA-APTLYLGMNGGTMERVYADKVLPAFEKANNVNVVIVPGT 60

Query: 67  SSDILAKAQANKDKPQMHVMFLDDGVMVRAIGMGLCQKQKPSQSLSEIYPAARFKDDMAS 126
           SSDILAK QANKD PQMHVMFLDDG+M RAI MGLC K  PS +L +I   A+ K++ A 
Sbjct: 61  SSDILAKVQANKDNPQMHVMFLDDGIMYRAIAMGLCDKLAPSPTLEQIPAKAKIKEE-AV 119

Query: 127 GVSLGMTGLAYNAKMFKEKGWAPPTSWMDLADPKYKGKVVFQSMSSSSFGLHGFLMFNRI 186
            V+LG+TGL YNAKMFKEKGWA PTSWMDLADP++K KVVFQS++SS+FGLHGFLMFNRI
Sbjct: 120 AVTLGVTGLGYNAKMFKEKGWAAPTSWMDLADPRFKDKVVFQSLASSTFGLHGFLMFNRI 179

Query: 187 QGGNDRNVEPGFKAWPTTIGPNVLEYIPSSAKLSEMVQTGEAAIFPLTPTAVAALKTKGI 246
           QGG++ NV+PGFKAWP T+GPNVLEYI SSAK+SEMVQT EAAIFPLTPT VA  K  G+
Sbjct: 180 QGGDETNVDPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAIFPLTPTQVATQKLLGV 239

Query: 247 PVEYAPPKEGAVVLMVGQCVIANNSEPELSQKLAEFLLSPVAQANVLQYGAQIPTNPKTP 306
           P+EYA PKEGAVVL V +CVIA N +PEL+QKLA FLL+  AQA  L+ G QIP+NP TP
Sbjct: 240 PMEYAQPKEGAVVLNVAECVIARNDQPELAQKLAAFLLTAEAQAPALEEGDQIPSNPTTP 299

Query: 307 AEGEGAAQVADINKWMKTAVTIDWESINANRPAWNARWNKTIEK 350
              +  A+V  +  +++TA++IDW+ +N  RP WNARW+++IE+
Sbjct: 300 TTDKTRARVEAMQGYLQTAISIDWDQVNQARPEWNARWSRSIER 343