Pairwise Alignments

Query, 357 a.a., ABC-type spermidine/putrescine transport systems, ATPase components from Variovorax sp. SCN45

Subject, 377 a.a., ATP-binding component of putrescine transport system (VIMSS) from Escherichia coli BW25113

 Score =  249 bits (637), Expect = 6e-71
 Identities = 140/328 (42%), Positives = 196/328 (59%), Gaps = 19/328 (5%)

Query: 4   LRLTDVTKFYGATRAVSAMNLAVEKGEFVSLLGPSGCGKTTTLQMIAGFEAVSSGRIELA 63
           L + ++TK Y    AV  ++L + KGE  +LLG SGCGK+T L+M+AGFE  S+G+I L 
Sbjct: 20  LEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLD 79

Query: 64  GKDITHAKANTRGLGIVFQTYALFPHMTVADNVSFGLEMRKMPKAERTERVKQALALVHL 123
           G D++      R + ++FQ+YALFPHMTV  N++FGL+  K+PKAE   RV + L LVH+
Sbjct: 80  GVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHM 139

Query: 124 EAHAARYPRELSGGQRQRVALARALVIEPPVLLLDEPLSNLDAKLREEMQFELRQIQRKV 183
           +  A R P +LSGGQRQRVALAR+L   P +LLLDEP+  LD KLR+ MQ E+  I  +V
Sbjct: 140 QEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV 199

Query: 184 GTTTVMVTHDQSEAMSISDRVVVMEGGCATQIDHPQRVYEHPSTRFISTFVGKANLLDCR 243
           G T VMVTHDQ EAM+++ R+ +M  G   QI  P+ +YEHP+TR+ + F+G  N+ +  
Sbjct: 200 GVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFE-- 257

Query: 244 VSGSGAARTCVEVGAL--------SLDVDDTGFRVDTAAL-LSVRPEKLQLV----PTGR 290
               G  +   E G +         L VD     VD   + +++RPEK+ L       G 
Sbjct: 258 ----GVLKERQEDGLVLDSPGLVHPLKVDADASVVDNVPVHVALRPEKIMLCEEPPANGC 313

Query: 291 GRIDGEVQERFFLGSQWLYRIATPVGDL 318
               GEV    +LG   +Y +    G +
Sbjct: 314 NFAVGEVIHIAYLGDLSVYHVRLKSGQM 341