Pairwise Alignments

Query, 427 a.a., ATP-dependent RNA helicase RhlE (EC 3.6.4.13) from Variovorax sp. SCN45

Subject, 614 a.a., DEAD/DEAH box helicase from Rhodanobacter sp000427505 FW510-R12

 Score =  288 bits (736), Expect = 4e-82
 Identities = 156/363 (42%), Positives = 223/363 (61%), Gaps = 8/363 (2%)

Query: 3   FDSLGLAPALVHAAAESGYAAPTAIQAAAIPAILQGRDVRGSAQTGSGKTAAFSLPLLQR 62
           F +L L P ++   A+ GY +P+ IQAA IP +L+GRDV G AQTG+GKTAAF+LP+L R
Sbjct: 15  FGALALHPDVLRVLADVGYESPSPIQAATIPPLLEGRDVLGQAQTGTGKTAAFALPILSR 74

Query: 63  LGAERPPGSTRRVRALVLVPTRELAAQVGETLRSLAQHLPERLKIVVAFGGVSINPQMMS 122
           +  ER PG   + +ALVL PTRELA QV E  ++ A HLP   +++  +GG S  PQ+ S
Sbjct: 75  I--ERKPG---KPQALVLAPTRELAIQVAEAFQTYAAHLPG-FQVLPIYGGQSYGPQLHS 128

Query: 123 LRGGADIVVATPGRLLDLADHNALRLDAVATLVLDEADRLFDLGFAEELGRILALLPRQR 182
           L+ G  +VV TPGR++D  D   L L  +  LVLDEAD +  +GF +++ ++L   P  R
Sbjct: 129 LKRGVHVVVGTPGRVIDHLDKGTLDLSELKFLVLDEADEMLRMGFIDDVEKVLQATPPGR 188

Query: 183 QNLLFSATFPPAIQALADATLRDPAVIDVQGEPGTEPNIVQRVIEVDAARRTQLLRHLLK 242
           Q  LFSAT P  I+ +A   L++P  + ++    T  NI QR   V    +   L  +L+
Sbjct: 189 QVALFSATMPAPIRKIAQRHLKEPVEVTIKAATTTAANIHQRYWFVSGMHKLDALTRILE 248

Query: 243 QHEGEWDRVLVFVATQHAAQTVAEKLYKNGIYAVPFHGDIAQGTRTDILAQFKQSRWDVV 302
                +D +++F  T+ A + +AEKL   G+ A   +GDIAQ  R  ++ Q K  + D++
Sbjct: 249 AEP--FDAMIIFARTKQATEELAEKLQARGLAAAAINGDIAQAQRERVIQQLKDGKLDIL 306

Query: 303 IATDLAARGIDIAQLPVVINYDLPRSPTDYIHRIGRTGRAGESGLAISFVSAASEAHFRL 362
           +ATD+AARG+D+ ++  V+NYD+P     Y+HRIGRTGRAG SG AI FVS         
Sbjct: 307 VATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVSPRERGMLHA 366

Query: 363 IEK 365
           IE+
Sbjct: 367 IER 369