Pairwise Alignments

Query, 258 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 695 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 2e-39
 Identities = 91/238 (38%), Positives = 129/238 (54%), Gaps = 19/238 (7%)

Query: 9   LLTPEYTPGMVALSFLISFAGSLVALICARRMIGADGKPNLAVVTCAAVALGGIGIWSMH 68
           +LT  Y+  +V +S  ++   S  AL    R+  A G+     +   A+A+G IG+WSMH
Sbjct: 1   MLTGSYSSSLVLISLCVAILASYTALDLTGRIATAKGRAACLWMGGGALAMG-IGVWSMH 59

Query: 69  FIGMLAYRLPVPISYNMPLTVVSLVAAILISGIALYMAGGRRHFSRSGWLAGSLLAGLGV 128
           FIGMLA+ LP+ + Y++ LT  SL+ A+L SG AL++   +          G+L+ G G+
Sbjct: 60  FIGMLAFSLPIDLGYDLALTAFSLLIAVLSSGFALWLVS-QPSLPALQLGFGALIMGAGI 118

Query: 129 CVMHYMGMYAMNMRASISFDIATVGLSALIAVTAAAAALWLAFNLRKFTHQV-----AAA 183
             MHY GM A+ M   I +D    G S LIAV A+AAALW+AF LR+ T  V      AA
Sbjct: 119 ACMHYTGMAALRMLPGIDYDPTLFGASLLIAVGASAAALWIAFRLRRHTPYVRQIRGLAA 178

Query: 184 AVMGVAVCTMHYVGMSAASMICTASAPADALAIGGSYMGLTVFGTAGAVLIFIYWVVT 241
            VMGVA+  MHY GM+AA+               GS+ G    G  G  L+++  + T
Sbjct: 179 VVMGVAIVGMHYTGMAAANF------------PEGSFCGALGGGLQGDSLVYLVLITT 224