Pairwise Alignments

Query, 258 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 754 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 72/248 (29%), Positives = 123/248 (49%), Gaps = 24/248 (9%)

Query: 14  YTPGMVALSFLISFAGSLVALICARRMIGADGKP-----NLAVVTCAAVALGGIGIWSMH 68
           + P +V L++ ++ A     L  A R   +D        N+    C A      GIW+MH
Sbjct: 24  HEPLLVLLAYFVACAACFATLDMAERQSHSDDPTAHRQWNMLGACCLAG-----GIWAMH 78

Query: 69  FIGMLAYRLPVPISYNMPLTVVSLVAAILISGIALYMAGGRRHFSRSGWLAGSLLAGLGV 128
           FI MLA+R PV + Y++ LT++SL+ A+ ++ +A++    R +     ++  + L GLG+
Sbjct: 79  FISMLAFRAPVDVHYDVSLTILSLLIALGVAWLAMHSL-ERSNMRAHYFVPSAGLIGLGI 137

Query: 129 CVMHYMGMYAMNMRASISFDIATVGLSALIAVTAAAAALWLAFNLRKFT------HQVAA 182
            +MH++GM AM   A   +    +  SA IA+  A  AL+LA  LR  +       +  A
Sbjct: 138 ILMHFVGMAAMETGARQYYQTGLLLASAAIALLTALTALYLARYLRNGSGTLYQAMKYGA 197

Query: 183 AAVMGVAVCTMHYVGMSAASMICTASAPADALAIGGSYMGLTVFGTAGAVLIFIYWVVTG 242
           + +M   +   H+  MSA +++  A   A  L  G + + L      G  + FI  +++G
Sbjct: 198 SLLMAGGIVATHFTAMSAMTLVIPADT-ALRLPSGDNSLQL------GLGIGFITLLISG 250

Query: 243 SSLDTPLA 250
           +S+   LA
Sbjct: 251 ASISAALA 258