Pairwise Alignments

Query, 376 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 385 a.a., no description from Variovorax sp. SCN45

 Score =  149 bits (376), Expect = 1e-40
 Identities = 110/376 (29%), Positives = 181/376 (48%), Gaps = 16/376 (4%)

Query: 6   RHFSLAAGAAAALGGFGIARAQGETPLVLGQSAPFTGPSAQLGIQFNQGAKLFLDQYNAQ 65
           R  +L   AA A  G G        P+ +G +   +      G    QG+  F    N  
Sbjct: 17  RRRALTGLAATAAAGLGFPALAQNKPVRVGTTFDNSSVEKANGQGLYQGSSAFFAALNKA 76

Query: 66  PGRRNLVIKNL--DDGYEPDRCAANTQKFIEED-VFALFGYIGTPTSLAALPLAVKDKVP 122
            G     ++ +  DD ++PD   AN   F ++  V AL   +GT  +       V D VP
Sbjct: 77  GGINGTKVELVMADDTFKPDVAKANALAFEKDSSVLALVHPLGTRQTAE-----VMDAVP 131

Query: 123 FIA---PVTGAMALREPFQKNVFHLRASYDDETAMVVKQLTNLGLKKIAVFQQNDAYGKA 179
            +A   P+TG ++LR+    N F +RA+YD E   +V     LG  +I +   +D  G++
Sbjct: 132 GMAVVGPITGTISLRKKASPNTFWVRANYDQEVDKLVSTAAVLGQSRIGLVHSDDPLGQS 191

Query: 180 GLDGVTAALAQQSLKPVALATV-ERNSVDVAQAVKTIVAARPDAVVQVSAYKSCAAFIRE 238
            L    A+LA+  L+P  +AT     S++V  A   I  A+P  VV V    +   F++ 
Sbjct: 192 VLAAFKASLAKAKLEPAVIATTPNTTSMEVGPAAAAIAKAKPQVVV-VGLAGTAPVFLKA 250

Query: 239 ARKAGYGGTFFNLSFVGTQALADELGKEAAGVMVTQVVPSPYNPANALTREFTEAVRKAG 298
            R+AG   + + LS   +   A  +G  A G+    VVPSPY+    + R + +A   A 
Sbjct: 251 LREAGNSSSAYGLSITASALAA--MGDLARGLGFVIVVPSPYSTKYEIVRRY-QADMVAS 307

Query: 299 NGASANFSSMEGYLAAKVLAEGLRKVSGKPTRDNLIAGLEGIDRQQFGGFEVSFSARNHV 358
                + +S+EGY+ A VLAEG+R+  G  TR ++++GL  I+    GG ++++   N  
Sbjct: 308 GIKEFSLTSLEGYMNAAVLAEGMRRAGGSLTRASVMSGLASIESFDLGGVKINYGRTNRE 367

Query: 359 GSKFVELSMLTGDGRV 374
           G +FV+++++   G++
Sbjct: 368 GGQFVDVAVIGSRGQM 383